Gene : Eucgr.I00235 E. grandis v2.0
Defline:  (1 of 1) PTHR24348:SF24 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  184
Name:  ? Eucgr.I00235 Secondary Identifier:  ? PAC:32062746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00235 0.5kb upstream 0.5kb upstream 4860 true Chr09: 4849764-4854623 Eucalyptus grandis
Eucgr.I00235 0.5kb upstream 0.5kb upstream 500 false Chr09: 4854124-4854623 Eucalyptus grandis
Eucgr.I00235 0.5kb downstream 0.5kb downstream 4860 true Chr09: 4849264-4854123 Eucalyptus grandis
Eucgr.I00235 0.5kb downstream 0.5kb downstream 500 false Chr09: 4849264-4849763 Eucalyptus grandis
Eucgr.I00235 1.0kb upstream 1.0kb upstream 5360 true Chr09: 4849764-4855123 Eucalyptus grandis
Eucgr.I00235 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4854124-4855123 Eucalyptus grandis
Eucgr.I00235 1.0kb downstream 1.0kb downstream 5360 true Chr09: 4848764-4854123 Eucalyptus grandis
Eucgr.I00235 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4848764-4849763 Eucalyptus grandis
Eucgr.I00235 2.0kb upstream 2.0kb upstream 6360 true Chr09: 4849764-4856123 Eucalyptus grandis
Eucgr.I00235 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4854124-4856123 Eucalyptus grandis
Eucgr.I00235 2.0kb downstream 2.0kb downstream 6360 true Chr09: 4847764-4854123 Eucalyptus grandis
Eucgr.I00235 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4847764-4849763 Eucalyptus grandis
Eucgr.I00235 5.0kb upstream 5.0kb upstream 9360 true Chr09: 4849764-4859123 Eucalyptus grandis
Eucgr.I00235 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4854124-4859123 Eucalyptus grandis
Eucgr.I00235 5.0kb downstream 5.0kb downstream 9360 true Chr09: 4844764-4854123 Eucalyptus grandis
Eucgr.I00235 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4844764-4849763 Eucalyptus grandis
Eucgr.I00235 10.0kb upstream 10.0kb upstream 14360 true Chr09: 4849764-4864123 Eucalyptus grandis
Eucgr.I00235 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4854124-4864123 Eucalyptus grandis
Eucgr.I00235 10.0kb downstream 10.0kb downstream 14360 true Chr09: 4839764-4854123 Eucalyptus grandis
Eucgr.I00235 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4839764-4849763 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060904 5270 Rosid View MSA
123741088 5271 Pentapetalae View MSA
122789398 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71281 0.0 4.86077    
cufflinks 0.552241 0.0 1.77792 Low Low
cufflinks 2.09539 0.0 5.80935   High
cufflinks 0.832384 0.0 2.53827    
cufflinks 1.14818 0.0 3.38716    
cufflinks 1.75192 0.0 4.9575    

0 Strain