Gene : Eucgr.I01234 E. grandis v2.0
Defline:  (1 of 2) PTHR13871:SF51 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  979
Name:  ? Eucgr.I01234 Secondary Identifier:  ? PAC:32064032
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01234 0.5kb upstream 0.5kb upstream 1489 true Chr09: 23162413-23163901 Eucalyptus grandis
Eucgr.I01234 0.5kb upstream 0.5kb upstream 500 false Chr09: 23162413-23162912 Eucalyptus grandis
Eucgr.I01234 0.5kb downstream 0.5kb downstream 1489 true Chr09: 23162913-23164401 Eucalyptus grandis
Eucgr.I01234 0.5kb downstream 0.5kb downstream 500 false Chr09: 23163902-23164401 Eucalyptus grandis
Eucgr.I01234 1.0kb upstream 1.0kb upstream 1989 true Chr09: 23161913-23163901 Eucalyptus grandis
Eucgr.I01234 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23161913-23162912 Eucalyptus grandis
Eucgr.I01234 1.0kb downstream 1.0kb downstream 1989 true Chr09: 23162913-23164901 Eucalyptus grandis
Eucgr.I01234 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23163902-23164901 Eucalyptus grandis
Eucgr.I01234 2.0kb upstream 2.0kb upstream 2989 true Chr09: 23160913-23163901 Eucalyptus grandis
Eucgr.I01234 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23160913-23162912 Eucalyptus grandis
Eucgr.I01234 2.0kb downstream 2.0kb downstream 2989 true Chr09: 23162913-23165901 Eucalyptus grandis
Eucgr.I01234 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23163902-23165901 Eucalyptus grandis
Eucgr.I01234 5.0kb upstream 5.0kb upstream 5989 true Chr09: 23157913-23163901 Eucalyptus grandis
Eucgr.I01234 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23157913-23162912 Eucalyptus grandis
Eucgr.I01234 5.0kb downstream 5.0kb downstream 5989 true Chr09: 23162913-23168901 Eucalyptus grandis
Eucgr.I01234 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23163902-23168901 Eucalyptus grandis
Eucgr.I01234 10.0kb upstream 10.0kb upstream 10989 true Chr09: 23152913-23163901 Eucalyptus grandis
Eucgr.I01234 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23152913-23162912 Eucalyptus grandis
Eucgr.I01234 10.0kb downstream 10.0kb downstream 10989 true Chr09: 23162913-23173901 Eucalyptus grandis
Eucgr.I01234 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23163902-23173901 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074302 5270 Rosid View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.17033 0.0 6.15915    
cufflinks 1.43286 0.0 4.24021    
cufflinks 1.46604 0.0 4.35717    
cufflinks 0.694501 0.0 2.25877   Low
cufflinks 27.9904 0.0 62.9084   High
cufflinks 7.19299 0.0 18.0526    

0 Strain