Gene : Eucgr.I01219 E. grandis v2.0
Defline:  (1 of 1) PTHR11139:SF71 - SERINE/THREONINE-PROTEIN KINASE SMG1 Genomic Order:  967
Name:  ? Eucgr.I01219 Secondary Identifier:  ? PAC:32065345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01219 0.5kb upstream 0.5kb upstream 18371 true Chr09: 23065716-23084086 Eucalyptus grandis
Eucgr.I01219 0.5kb upstream 0.5kb upstream 500 false Chr09: 23065716-23066215 Eucalyptus grandis
Eucgr.I01219 0.5kb downstream 0.5kb downstream 18371 true Chr09: 23066216-23084586 Eucalyptus grandis
Eucgr.I01219 0.5kb downstream 0.5kb downstream 500 false Chr09: 23084087-23084586 Eucalyptus grandis
Eucgr.I01219 1.0kb upstream 1.0kb upstream 18871 true Chr09: 23065216-23084086 Eucalyptus grandis
Eucgr.I01219 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23065216-23066215 Eucalyptus grandis
Eucgr.I01219 1.0kb downstream 1.0kb downstream 18871 true Chr09: 23066216-23085086 Eucalyptus grandis
Eucgr.I01219 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23084087-23085086 Eucalyptus grandis
Eucgr.I01219 2.0kb upstream 2.0kb upstream 19871 true Chr09: 23064216-23084086 Eucalyptus grandis
Eucgr.I01219 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23064216-23066215 Eucalyptus grandis
Eucgr.I01219 2.0kb downstream 2.0kb downstream 19871 true Chr09: 23066216-23086086 Eucalyptus grandis
Eucgr.I01219 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23084087-23086086 Eucalyptus grandis
Eucgr.I01219 5.0kb upstream 5.0kb upstream 22871 true Chr09: 23061216-23084086 Eucalyptus grandis
Eucgr.I01219 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23061216-23066215 Eucalyptus grandis
Eucgr.I01219 5.0kb downstream 5.0kb downstream 22871 true Chr09: 23066216-23089086 Eucalyptus grandis
Eucgr.I01219 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23084087-23089086 Eucalyptus grandis
Eucgr.I01219 10.0kb upstream 10.0kb upstream 27871 true Chr09: 23056216-23084086 Eucalyptus grandis
Eucgr.I01219 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23056216-23066215 Eucalyptus grandis
Eucgr.I01219 10.0kb downstream 10.0kb downstream 27871 true Chr09: 23066216-23094086 Eucalyptus grandis
Eucgr.I01219 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23084087-23094086 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050345 5270 Rosid View MSA
123740194 5271 Pentapetalae View MSA
122789167 5272 Eudicot View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.00273 0.0 6.75423    
cufflinks 2.83855 0.0 6.37564    
cufflinks 3.43912 0.0 8.87977    
cufflinks 1.99017 0.0 4.59519   Low
cufflinks 2.00371 0.0 4.62613   Low
cufflinks 3.33079 0.0 7.47572    

0 Strain