Gene : Eucgr.I01063 E. grandis v2.0
Defline:  (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE Genomic Order:  829
Name:  ? Eucgr.I01063 Secondary Identifier:  ? PAC:32064185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01063 0.5kb upstream 0.5kb upstream 3689 true Chr09: 21566775-21570463 Eucalyptus grandis
Eucgr.I01063 0.5kb upstream 0.5kb upstream 500 false Chr09: 21569964-21570463 Eucalyptus grandis
Eucgr.I01063 0.5kb downstream 0.5kb downstream 3689 true Chr09: 21566275-21569963 Eucalyptus grandis
Eucgr.I01063 0.5kb downstream 0.5kb downstream 500 false Chr09: 21566275-21566774 Eucalyptus grandis
Eucgr.I01063 1.0kb upstream 1.0kb upstream 4189 true Chr09: 21566775-21570963 Eucalyptus grandis
Eucgr.I01063 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21569964-21570963 Eucalyptus grandis
Eucgr.I01063 1.0kb downstream 1.0kb downstream 4189 true Chr09: 21565775-21569963 Eucalyptus grandis
Eucgr.I01063 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21565775-21566774 Eucalyptus grandis
Eucgr.I01063 2.0kb upstream 2.0kb upstream 5189 true Chr09: 21566775-21571963 Eucalyptus grandis
Eucgr.I01063 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21569964-21571963 Eucalyptus grandis
Eucgr.I01063 2.0kb downstream 2.0kb downstream 5189 true Chr09: 21564775-21569963 Eucalyptus grandis
Eucgr.I01063 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21564775-21566774 Eucalyptus grandis
Eucgr.I01063 5.0kb upstream 5.0kb upstream 8189 true Chr09: 21566775-21574963 Eucalyptus grandis
Eucgr.I01063 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21569964-21574963 Eucalyptus grandis
Eucgr.I01063 5.0kb downstream 5.0kb downstream 8189 true Chr09: 21561775-21569963 Eucalyptus grandis
Eucgr.I01063 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21561775-21566774 Eucalyptus grandis
Eucgr.I01063 10.0kb upstream 10.0kb upstream 13189 true Chr09: 21566775-21579963 Eucalyptus grandis
Eucgr.I01063 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21569964-21579963 Eucalyptus grandis
Eucgr.I01063 10.0kb downstream 10.0kb downstream 13189 true Chr09: 21556775-21569963 Eucalyptus grandis
Eucgr.I01063 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21556775-21566774 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068873 5270 Rosid View MSA
123737735 5271 Pentapetalae View MSA
122788749 5272 Eudicot View MSA
122042435 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346752 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.01671 0.0 16.6476    
cufflinks 8.57232 0.0 19.897    
cufflinks 10.3132 0.0 25.076    
cufflinks 8.14398 0.0 18.9861    
cufflinks 3.39585 0.0 8.9251   Low
cufflinks 11.3291 0.0 27.3121    

0 Strain