Gene : Eucgr.I01566 E. grandis v2.0
Defline:  (1 of 1) PTHR12419//PTHR12419:SF3 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  1293
Name:  ? Eucgr.I01566 Secondary Identifier:  ? PAC:32065283
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01566 0.5kb upstream 0.5kb upstream 5299 true Chr09: 25561856-25567154 Eucalyptus grandis
Eucgr.I01566 0.5kb upstream 0.5kb upstream 500 false Chr09: 25566655-25567154 Eucalyptus grandis
Eucgr.I01566 0.5kb downstream 0.5kb downstream 5299 true Chr09: 25561356-25566654 Eucalyptus grandis
Eucgr.I01566 0.5kb downstream 0.5kb downstream 500 false Chr09: 25561356-25561855 Eucalyptus grandis
Eucgr.I01566 1.0kb upstream 1.0kb upstream 5799 true Chr09: 25561856-25567654 Eucalyptus grandis
Eucgr.I01566 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25566655-25567654 Eucalyptus grandis
Eucgr.I01566 1.0kb downstream 1.0kb downstream 5799 true Chr09: 25560856-25566654 Eucalyptus grandis
Eucgr.I01566 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25560856-25561855 Eucalyptus grandis
Eucgr.I01566 2.0kb upstream 2.0kb upstream 6799 true Chr09: 25561856-25568654 Eucalyptus grandis
Eucgr.I01566 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25566655-25568654 Eucalyptus grandis
Eucgr.I01566 2.0kb downstream 2.0kb downstream 6799 true Chr09: 25559856-25566654 Eucalyptus grandis
Eucgr.I01566 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25559856-25561855 Eucalyptus grandis
Eucgr.I01566 5.0kb upstream 5.0kb upstream 9799 true Chr09: 25561856-25571654 Eucalyptus grandis
Eucgr.I01566 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25566655-25571654 Eucalyptus grandis
Eucgr.I01566 5.0kb downstream 5.0kb downstream 9799 true Chr09: 25556856-25566654 Eucalyptus grandis
Eucgr.I01566 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25556856-25561855 Eucalyptus grandis
Eucgr.I01566 10.0kb upstream 10.0kb upstream 14799 true Chr09: 25561856-25576654 Eucalyptus grandis
Eucgr.I01566 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25566655-25576654 Eucalyptus grandis
Eucgr.I01566 10.0kb downstream 10.0kb downstream 14799 true Chr09: 25551856-25566654 Eucalyptus grandis
Eucgr.I01566 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25551856-25561855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052407 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0537 0.0 37.8146    
cufflinks 95.1849 0.0 211.757 High  
cufflinks 26.4205 0.0 59.8606 High  
cufflinks 125.518 0.0 281.989 High High
cufflinks 97.5109 0.0 217.067 High  
cufflinks 11.5383 0.0 28.1963   Low

0 Strain