Gene : Eucgr.I01521 E. grandis v2.0
Defline:  (1 of 2) PTHR10796 - PATCHED-RELATED Genomic Order:  1252
Name:  ? Eucgr.I01521 Secondary Identifier:  ? PAC:32064282
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01521 0.5kb upstream 0.5kb upstream 21616 true Chr09: 25291565-25313180 Eucalyptus grandis
Eucgr.I01521 0.5kb upstream 0.5kb upstream 500 false Chr09: 25312681-25313180 Eucalyptus grandis
Eucgr.I01521 0.5kb downstream 0.5kb downstream 21616 true Chr09: 25291065-25312680 Eucalyptus grandis
Eucgr.I01521 0.5kb downstream 0.5kb downstream 500 false Chr09: 25291065-25291564 Eucalyptus grandis
Eucgr.I01521 1.0kb upstream 1.0kb upstream 22116 true Chr09: 25291565-25313680 Eucalyptus grandis
Eucgr.I01521 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25312681-25313680 Eucalyptus grandis
Eucgr.I01521 1.0kb downstream 1.0kb downstream 22116 true Chr09: 25290565-25312680 Eucalyptus grandis
Eucgr.I01521 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25290565-25291564 Eucalyptus grandis
Eucgr.I01521 2.0kb upstream 2.0kb upstream 23116 true Chr09: 25291565-25314680 Eucalyptus grandis
Eucgr.I01521 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25312681-25314680 Eucalyptus grandis
Eucgr.I01521 2.0kb downstream 2.0kb downstream 23116 true Chr09: 25289565-25312680 Eucalyptus grandis
Eucgr.I01521 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25289565-25291564 Eucalyptus grandis
Eucgr.I01521 5.0kb upstream 5.0kb upstream 26116 true Chr09: 25291565-25317680 Eucalyptus grandis
Eucgr.I01521 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25312681-25317680 Eucalyptus grandis
Eucgr.I01521 5.0kb downstream 5.0kb downstream 26116 true Chr09: 25286565-25312680 Eucalyptus grandis
Eucgr.I01521 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25286565-25291564 Eucalyptus grandis
Eucgr.I01521 10.0kb upstream 10.0kb upstream 31116 true Chr09: 25291565-25322680 Eucalyptus grandis
Eucgr.I01521 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25312681-25322680 Eucalyptus grandis
Eucgr.I01521 10.0kb downstream 10.0kb downstream 31116 true Chr09: 25281565-25312680 Eucalyptus grandis
Eucgr.I01521 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25281565-25291564 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2009 0.0 27.461   Low
cufflinks 24.1977 0.0 57.2362   High
cufflinks 16.4902 0.0 37.7241    
cufflinks 18.7534 0.0 43.2998    
cufflinks 18.1402 0.0 41.723    
cufflinks 20.3912 0.0 46.9628    

0 Strain