Gene : Eucgr.I01509 E. grandis v2.0
Defline:  (1 of 3) PTHR11206:SF149 - MATE EFFLUX FAMILY PROTEIN 3, CHLOROPLASTIC Genomic Order:  1240
Name:  ? Eucgr.I01509 Secondary Identifier:  ? PAC:32064004
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Ontology Annotation Displayer

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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01509 0.5kb upstream 0.5kb upstream 8513 true Chr09: 25194042-25202554 Eucalyptus grandis
Eucgr.I01509 0.5kb upstream 0.5kb upstream 500 false Chr09: 25194042-25194541 Eucalyptus grandis
Eucgr.I01509 0.5kb downstream 0.5kb downstream 8513 true Chr09: 25194542-25203054 Eucalyptus grandis
Eucgr.I01509 0.5kb downstream 0.5kb downstream 500 false Chr09: 25202555-25203054 Eucalyptus grandis
Eucgr.I01509 1.0kb upstream 1.0kb upstream 9013 true Chr09: 25193542-25202554 Eucalyptus grandis
Eucgr.I01509 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25193542-25194541 Eucalyptus grandis
Eucgr.I01509 1.0kb downstream 1.0kb downstream 9013 true Chr09: 25194542-25203554 Eucalyptus grandis
Eucgr.I01509 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25202555-25203554 Eucalyptus grandis
Eucgr.I01509 2.0kb upstream 2.0kb upstream 10013 true Chr09: 25192542-25202554 Eucalyptus grandis
Eucgr.I01509 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25192542-25194541 Eucalyptus grandis
Eucgr.I01509 2.0kb downstream 2.0kb downstream 10013 true Chr09: 25194542-25204554 Eucalyptus grandis
Eucgr.I01509 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25202555-25204554 Eucalyptus grandis
Eucgr.I01509 5.0kb upstream 5.0kb upstream 13013 true Chr09: 25189542-25202554 Eucalyptus grandis
Eucgr.I01509 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25189542-25194541 Eucalyptus grandis
Eucgr.I01509 5.0kb downstream 5.0kb downstream 13013 true Chr09: 25194542-25207554 Eucalyptus grandis
Eucgr.I01509 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25202555-25207554 Eucalyptus grandis
Eucgr.I01509 10.0kb upstream 10.0kb upstream 18013 true Chr09: 25184542-25202554 Eucalyptus grandis
Eucgr.I01509 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25184542-25194541 Eucalyptus grandis
Eucgr.I01509 10.0kb downstream 10.0kb downstream 18013 true Chr09: 25194542-25212554 Eucalyptus grandis
Eucgr.I01509 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25202555-25212554 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066316 5270 Rosid View MSA
123744854 5271 Pentapetalae View MSA
122788887 5272 Eudicot View MSA
122043189 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48867 0.0 6.462    
cufflinks 1.60259 0.0 4.31048   Low
cufflinks 3.00195 0.0 7.62336    
cufflinks 5.70172 0.0 13.5005   High
cufflinks 3.56576 0.0 8.8723    
cufflinks 5.4812 0.0 13.2067   High

0 Strain