Gene : Eucgr.I01451 E. grandis v2.0
Defline:  (1 of 1) PTHR10938//PTHR10938:SF2 - TRANSLATION INITIATION FACTOR IF-3 Genomic Order:  1186
Name:  ? Eucgr.I01451 Secondary Identifier:  ? PAC:32064155
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01451 0.5kb upstream 0.5kb upstream 5181 true Chr09: 24852925-24858105 Eucalyptus grandis
Eucgr.I01451 0.5kb upstream 0.5kb upstream 500 false Chr09: 24857606-24858105 Eucalyptus grandis
Eucgr.I01451 0.5kb downstream 0.5kb downstream 5181 true Chr09: 24852425-24857605 Eucalyptus grandis
Eucgr.I01451 0.5kb downstream 0.5kb downstream 500 false Chr09: 24852425-24852924 Eucalyptus grandis
Eucgr.I01451 1.0kb upstream 1.0kb upstream 5681 true Chr09: 24852925-24858605 Eucalyptus grandis
Eucgr.I01451 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24857606-24858605 Eucalyptus grandis
Eucgr.I01451 1.0kb downstream 1.0kb downstream 5681 true Chr09: 24851925-24857605 Eucalyptus grandis
Eucgr.I01451 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24851925-24852924 Eucalyptus grandis
Eucgr.I01451 2.0kb upstream 2.0kb upstream 6681 true Chr09: 24852925-24859605 Eucalyptus grandis
Eucgr.I01451 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24857606-24859605 Eucalyptus grandis
Eucgr.I01451 2.0kb downstream 2.0kb downstream 6681 true Chr09: 24850925-24857605 Eucalyptus grandis
Eucgr.I01451 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24850925-24852924 Eucalyptus grandis
Eucgr.I01451 5.0kb upstream 5.0kb upstream 9681 true Chr09: 24852925-24862605 Eucalyptus grandis
Eucgr.I01451 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24857606-24862605 Eucalyptus grandis
Eucgr.I01451 5.0kb downstream 5.0kb downstream 9681 true Chr09: 24847925-24857605 Eucalyptus grandis
Eucgr.I01451 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24847925-24852924 Eucalyptus grandis
Eucgr.I01451 10.0kb upstream 10.0kb upstream 14681 true Chr09: 24852925-24867605 Eucalyptus grandis
Eucgr.I01451 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24857606-24867605 Eucalyptus grandis
Eucgr.I01451 10.0kb downstream 10.0kb downstream 14681 true Chr09: 24842925-24857605 Eucalyptus grandis
Eucgr.I01451 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24842925-24852924 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064425 5270 Rosid View MSA
123743196 5271 Pentapetalae View MSA
122770560 5272 Eudicot View MSA
122049946 5273 Angiosperm View MSA
121349179 5274 Embryophyte View MSA
123425847 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4692 0.0 25.7395    
cufflinks 10.4445 0.0 23.5274    
cufflinks 10.8521 0.0 24.4089    
cufflinks 10.0141 0.0 22.5749    
cufflinks 7.93018 0.0 18.1622   Low
cufflinks 12.7568 0.0 28.5294   High

0 Strain