Gene : Eucgr.I01416 E. grandis v2.0
Defline:  (1 of 2) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  1152
Name:  ? Eucgr.I01416 Secondary Identifier:  ? PAC:32063149
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01416 0.5kb upstream 0.5kb upstream 3117 true Chr09: 24562723-24565839 Eucalyptus grandis
Eucgr.I01416 0.5kb upstream 0.5kb upstream 500 false Chr09: 24562723-24563222 Eucalyptus grandis
Eucgr.I01416 0.5kb downstream 0.5kb downstream 3117 true Chr09: 24563223-24566339 Eucalyptus grandis
Eucgr.I01416 0.5kb downstream 0.5kb downstream 500 false Chr09: 24565840-24566339 Eucalyptus grandis
Eucgr.I01416 1.0kb upstream 1.0kb upstream 3617 true Chr09: 24562223-24565839 Eucalyptus grandis
Eucgr.I01416 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24562223-24563222 Eucalyptus grandis
Eucgr.I01416 1.0kb downstream 1.0kb downstream 3617 true Chr09: 24563223-24566839 Eucalyptus grandis
Eucgr.I01416 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24565840-24566839 Eucalyptus grandis
Eucgr.I01416 2.0kb upstream 2.0kb upstream 4617 true Chr09: 24561223-24565839 Eucalyptus grandis
Eucgr.I01416 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24561223-24563222 Eucalyptus grandis
Eucgr.I01416 2.0kb downstream 2.0kb downstream 4617 true Chr09: 24563223-24567839 Eucalyptus grandis
Eucgr.I01416 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24565840-24567839 Eucalyptus grandis
Eucgr.I01416 5.0kb upstream 5.0kb upstream 7617 true Chr09: 24558223-24565839 Eucalyptus grandis
Eucgr.I01416 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24558223-24563222 Eucalyptus grandis
Eucgr.I01416 5.0kb downstream 5.0kb downstream 7617 true Chr09: 24563223-24570839 Eucalyptus grandis
Eucgr.I01416 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24565840-24570839 Eucalyptus grandis
Eucgr.I01416 10.0kb upstream 10.0kb upstream 12617 true Chr09: 24553223-24565839 Eucalyptus grandis
Eucgr.I01416 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24553223-24563222 Eucalyptus grandis
Eucgr.I01416 10.0kb downstream 10.0kb downstream 12617 true Chr09: 24563223-24575839 Eucalyptus grandis
Eucgr.I01416 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24565840-24575839 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062533 5270 Rosid View MSA
123737163 5271 Pentapetalae View MSA
122793272 5272 Eudicot View MSA
122047570 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0072 0.0 65.2873 High  
cufflinks 39.5041 0.0 90.5645   High
cufflinks 32.3173 0.0 73.1663 High  
cufflinks 40.2697 0.0 101.197 High High
cufflinks 27.2631 0.0 61.3065    
cufflinks 21.3628 0.0 47.8339   Low

0 Strain