Gene : Eucgr.I01280 E. grandis v2.0
Defline:  (1 of 1) PTHR10920:SF13 - PRE-RRNA PROCESSING PROTEIN FTSJ3 Genomic Order:  1024
Name:  ? Eucgr.I01280 Secondary Identifier:  ? PAC:32065079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01280 0.5kb upstream 0.5kb upstream 5820 true Chr09: 23498007-23503826 Eucalyptus grandis
Eucgr.I01280 0.5kb upstream 0.5kb upstream 500 false Chr09: 23503327-23503826 Eucalyptus grandis
Eucgr.I01280 0.5kb downstream 0.5kb downstream 5820 true Chr09: 23497507-23503326 Eucalyptus grandis
Eucgr.I01280 0.5kb downstream 0.5kb downstream 500 false Chr09: 23497507-23498006 Eucalyptus grandis
Eucgr.I01280 1.0kb upstream 1.0kb upstream 6320 true Chr09: 23498007-23504326 Eucalyptus grandis
Eucgr.I01280 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23503327-23504326 Eucalyptus grandis
Eucgr.I01280 1.0kb downstream 1.0kb downstream 6320 true Chr09: 23497007-23503326 Eucalyptus grandis
Eucgr.I01280 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23497007-23498006 Eucalyptus grandis
Eucgr.I01280 2.0kb upstream 2.0kb upstream 7320 true Chr09: 23498007-23505326 Eucalyptus grandis
Eucgr.I01280 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23503327-23505326 Eucalyptus grandis
Eucgr.I01280 2.0kb downstream 2.0kb downstream 7320 true Chr09: 23496007-23503326 Eucalyptus grandis
Eucgr.I01280 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23496007-23498006 Eucalyptus grandis
Eucgr.I01280 5.0kb upstream 5.0kb upstream 10320 true Chr09: 23498007-23508326 Eucalyptus grandis
Eucgr.I01280 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23503327-23508326 Eucalyptus grandis
Eucgr.I01280 5.0kb downstream 5.0kb downstream 10320 true Chr09: 23493007-23503326 Eucalyptus grandis
Eucgr.I01280 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23493007-23498006 Eucalyptus grandis
Eucgr.I01280 10.0kb upstream 10.0kb upstream 15320 true Chr09: 23498007-23513326 Eucalyptus grandis
Eucgr.I01280 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23503327-23513326 Eucalyptus grandis
Eucgr.I01280 10.0kb downstream 10.0kb downstream 15320 true Chr09: 23488007-23503326 Eucalyptus grandis
Eucgr.I01280 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23488007-23498006 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066192 5270 Rosid View MSA
123747132 5271 Pentapetalae View MSA
122787166 5272 Eudicot View MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.58621 0.0 16.9683    
cufflinks 3.22413 0.0 7.64186   Low
cufflinks 7.21937 0.0 16.1597    
cufflinks 5.41138 0.0 12.2748    
cufflinks 3.15127 0.0 7.47594   Low
cufflinks 10.4486 0.0 23.1693   High

0 Strain