Gene : Eucgr.I01920 E. grandis v2.0
Defline:  (1 of 1) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Genomic Order:  1620
Name:  ? Eucgr.I01920 Secondary Identifier:  ? PAC:32062635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01920 0.5kb upstream 0.5kb upstream 6142 true Chr09: 29148200-29154341 Eucalyptus grandis
Eucgr.I01920 0.5kb upstream 0.5kb upstream 500 false Chr09: 29153842-29154341 Eucalyptus grandis
Eucgr.I01920 0.5kb downstream 0.5kb downstream 6142 true Chr09: 29147700-29153841 Eucalyptus grandis
Eucgr.I01920 0.5kb downstream 0.5kb downstream 500 false Chr09: 29147700-29148199 Eucalyptus grandis
Eucgr.I01920 1.0kb upstream 1.0kb upstream 6642 true Chr09: 29148200-29154841 Eucalyptus grandis
Eucgr.I01920 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29153842-29154841 Eucalyptus grandis
Eucgr.I01920 1.0kb downstream 1.0kb downstream 6642 true Chr09: 29147200-29153841 Eucalyptus grandis
Eucgr.I01920 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29147200-29148199 Eucalyptus grandis
Eucgr.I01920 2.0kb upstream 2.0kb upstream 7642 true Chr09: 29148200-29155841 Eucalyptus grandis
Eucgr.I01920 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29153842-29155841 Eucalyptus grandis
Eucgr.I01920 2.0kb downstream 2.0kb downstream 7642 true Chr09: 29146200-29153841 Eucalyptus grandis
Eucgr.I01920 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29146200-29148199 Eucalyptus grandis
Eucgr.I01920 5.0kb upstream 5.0kb upstream 10642 true Chr09: 29148200-29158841 Eucalyptus grandis
Eucgr.I01920 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29153842-29158841 Eucalyptus grandis
Eucgr.I01920 5.0kb downstream 5.0kb downstream 10642 true Chr09: 29143200-29153841 Eucalyptus grandis
Eucgr.I01920 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29143200-29148199 Eucalyptus grandis
Eucgr.I01920 10.0kb upstream 10.0kb upstream 15642 true Chr09: 29148200-29163841 Eucalyptus grandis
Eucgr.I01920 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29153842-29163841 Eucalyptus grandis
Eucgr.I01920 10.0kb downstream 10.0kb downstream 15642 true Chr09: 29138200-29153841 Eucalyptus grandis
Eucgr.I01920 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29138200-29148199 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.0725 0.0 81.1868 High  
cufflinks 38.5091 0.0 92.1296    
cufflinks 43.3825 0.0 112.754 High High
cufflinks 31.1367 0.0 78.4386    
cufflinks 43.4777 0.0 104.624 High High
cufflinks 30.8307 0.0 77.2596    

0 Strain