Gene : Eucgr.I01727 E. grandis v2.0
Defline:  (1 of 2) PTHR22835//PTHR22835:SF219 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1456
Name:  ? Eucgr.I01727 Secondary Identifier:  ? PAC:32064680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I01727 0.5kb upstream 0.5kb upstream 2820 true Chr09: 27276772-27279591 Eucalyptus grandis
Eucgr.I01727 0.5kb upstream 0.5kb upstream 500 false Chr09: 27276772-27277271 Eucalyptus grandis
Eucgr.I01727 0.5kb downstream 0.5kb downstream 2820 true Chr09: 27277272-27280091 Eucalyptus grandis
Eucgr.I01727 0.5kb downstream 0.5kb downstream 500 false Chr09: 27279592-27280091 Eucalyptus grandis
Eucgr.I01727 1.0kb upstream 1.0kb upstream 3320 true Chr09: 27276272-27279591 Eucalyptus grandis
Eucgr.I01727 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27276272-27277271 Eucalyptus grandis
Eucgr.I01727 1.0kb downstream 1.0kb downstream 3320 true Chr09: 27277272-27280591 Eucalyptus grandis
Eucgr.I01727 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27279592-27280591 Eucalyptus grandis
Eucgr.I01727 2.0kb upstream 2.0kb upstream 4320 true Chr09: 27275272-27279591 Eucalyptus grandis
Eucgr.I01727 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27275272-27277271 Eucalyptus grandis
Eucgr.I01727 2.0kb downstream 2.0kb downstream 4320 true Chr09: 27277272-27281591 Eucalyptus grandis
Eucgr.I01727 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27279592-27281591 Eucalyptus grandis
Eucgr.I01727 5.0kb upstream 5.0kb upstream 7320 true Chr09: 27272272-27279591 Eucalyptus grandis
Eucgr.I01727 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27272272-27277271 Eucalyptus grandis
Eucgr.I01727 5.0kb downstream 5.0kb downstream 7320 true Chr09: 27277272-27284591 Eucalyptus grandis
Eucgr.I01727 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27279592-27284591 Eucalyptus grandis
Eucgr.I01727 10.0kb upstream 10.0kb upstream 12320 true Chr09: 27267272-27279591 Eucalyptus grandis
Eucgr.I01727 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27267272-27277271 Eucalyptus grandis
Eucgr.I01727 10.0kb downstream 10.0kb downstream 12320 true Chr09: 27277272-27289591 Eucalyptus grandis
Eucgr.I01727 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27279592-27289591 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060956 5270 Rosid View MSA
123751709 5271 Pentapetalae View MSA
122792759 5272 Eudicot View MSA
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42601 0.0 13.1087   High
cufflinks 0.773649 0.0 2.28943 Low  
cufflinks 2.34838 0.0 6.19583    
cufflinks 3.48648 0.0 8.85741    
cufflinks 1.05088 0.0 3.00456    
cufflinks 0.718945 0.0 2.12562 Low Low

0 Strain