Gene : Eucgr.I02203 E. grandis v2.0
Defline:  (1 of 1) PTHR14374 - FOIE GRAS Genomic Order:  1863
Name:  ? Eucgr.I02203 Secondary Identifier:  ? PAC:32064413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02203 0.5kb upstream 0.5kb upstream 10096 true Chr09: 31953821-31963916 Eucalyptus grandis
Eucgr.I02203 0.5kb upstream 0.5kb upstream 500 false Chr09: 31953821-31954320 Eucalyptus grandis
Eucgr.I02203 0.5kb downstream 0.5kb downstream 10096 true Chr09: 31954321-31964416 Eucalyptus grandis
Eucgr.I02203 0.5kb downstream 0.5kb downstream 500 false Chr09: 31963917-31964416 Eucalyptus grandis
Eucgr.I02203 1.0kb upstream 1.0kb upstream 10596 true Chr09: 31953321-31963916 Eucalyptus grandis
Eucgr.I02203 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31953321-31954320 Eucalyptus grandis
Eucgr.I02203 1.0kb downstream 1.0kb downstream 10596 true Chr09: 31954321-31964916 Eucalyptus grandis
Eucgr.I02203 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31963917-31964916 Eucalyptus grandis
Eucgr.I02203 2.0kb upstream 2.0kb upstream 11596 true Chr09: 31952321-31963916 Eucalyptus grandis
Eucgr.I02203 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31952321-31954320 Eucalyptus grandis
Eucgr.I02203 2.0kb downstream 2.0kb downstream 11596 true Chr09: 31954321-31965916 Eucalyptus grandis
Eucgr.I02203 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31963917-31965916 Eucalyptus grandis
Eucgr.I02203 5.0kb upstream 5.0kb upstream 14596 true Chr09: 31949321-31963916 Eucalyptus grandis
Eucgr.I02203 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31949321-31954320 Eucalyptus grandis
Eucgr.I02203 5.0kb downstream 5.0kb downstream 14596 true Chr09: 31954321-31968916 Eucalyptus grandis
Eucgr.I02203 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31963917-31968916 Eucalyptus grandis
Eucgr.I02203 10.0kb upstream 10.0kb upstream 19596 true Chr09: 31944321-31963916 Eucalyptus grandis
Eucgr.I02203 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31944321-31954320 Eucalyptus grandis
Eucgr.I02203 10.0kb downstream 10.0kb downstream 19596 true Chr09: 31954321-31973916 Eucalyptus grandis
Eucgr.I02203 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31963917-31973916 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.84834 0.0 21.8026    
cufflinks 10.8958 0.0 24.0955    
cufflinks 9.3247 0.0 20.6481    
cufflinks 17.2841 0.0 38.46   High
cufflinks 6.66321 0.0 14.8744   Low
cufflinks 11.2386 0.0 24.8598    

0 Strain