Gene : Eucgr.I02169 E. grandis v2.0
Defline:  (1 of 8) PTHR23073 - 26S PROTEASE REGULATORY SUBUNIT Genomic Order:  1839
Name:  ? Eucgr.I02169 Secondary Identifier:  ? PAC:32063894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02169 0.5kb upstream 0.5kb upstream 5250 true Chr09: 31564286-31569535 Eucalyptus grandis
Eucgr.I02169 0.5kb upstream 0.5kb upstream 500 false Chr09: 31564286-31564785 Eucalyptus grandis
Eucgr.I02169 0.5kb downstream 0.5kb downstream 5250 true Chr09: 31564786-31570035 Eucalyptus grandis
Eucgr.I02169 0.5kb downstream 0.5kb downstream 500 false Chr09: 31569536-31570035 Eucalyptus grandis
Eucgr.I02169 1.0kb upstream 1.0kb upstream 5750 true Chr09: 31563786-31569535 Eucalyptus grandis
Eucgr.I02169 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31563786-31564785 Eucalyptus grandis
Eucgr.I02169 1.0kb downstream 1.0kb downstream 5750 true Chr09: 31564786-31570535 Eucalyptus grandis
Eucgr.I02169 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31569536-31570535 Eucalyptus grandis
Eucgr.I02169 2.0kb upstream 2.0kb upstream 6750 true Chr09: 31562786-31569535 Eucalyptus grandis
Eucgr.I02169 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31562786-31564785 Eucalyptus grandis
Eucgr.I02169 2.0kb downstream 2.0kb downstream 6750 true Chr09: 31564786-31571535 Eucalyptus grandis
Eucgr.I02169 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31569536-31571535 Eucalyptus grandis
Eucgr.I02169 5.0kb upstream 5.0kb upstream 9750 true Chr09: 31559786-31569535 Eucalyptus grandis
Eucgr.I02169 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31559786-31564785 Eucalyptus grandis
Eucgr.I02169 5.0kb downstream 5.0kb downstream 9750 true Chr09: 31564786-31574535 Eucalyptus grandis
Eucgr.I02169 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31569536-31574535 Eucalyptus grandis
Eucgr.I02169 10.0kb upstream 10.0kb upstream 14750 true Chr09: 31554786-31569535 Eucalyptus grandis
Eucgr.I02169 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31554786-31564785 Eucalyptus grandis
Eucgr.I02169 10.0kb downstream 10.0kb downstream 14750 true Chr09: 31564786-31579535 Eucalyptus grandis
Eucgr.I02169 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31569536-31579535 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068785 5270 Rosid View MSA
123737965 5271 Pentapetalae View MSA
122792051 5272 Eudicot View MSA
122047363 5273 Angiosperm View MSA
121351004 5274 Embryophyte View MSA
123424117 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.2512 0.0 64.7022 High  
cufflinks 44.9439 0.0 100.25 High High
cufflinks 27.967 0.0 61.8519 High  
cufflinks 40.0013 0.0 88.9415 High  
cufflinks 35.1167 0.0 77.8266    
cufflinks 26.4644 0.0 58.525   Low

0 Strain