Gene : Eucgr.I02158 E. grandis v2.0
Defline:  (1 of 2) PTHR22970:SF21 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  1830
Name:  ? Eucgr.I02158 Secondary Identifier:  ? PAC:32064684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02158 0.5kb upstream 0.5kb upstream 7267 true Chr09: 31446202-31453468 Eucalyptus grandis
Eucgr.I02158 0.5kb upstream 0.5kb upstream 500 false Chr09: 31452969-31453468 Eucalyptus grandis
Eucgr.I02158 0.5kb downstream 0.5kb downstream 7267 true Chr09: 31445702-31452968 Eucalyptus grandis
Eucgr.I02158 0.5kb downstream 0.5kb downstream 500 false Chr09: 31445702-31446201 Eucalyptus grandis
Eucgr.I02158 1.0kb upstream 1.0kb upstream 7767 true Chr09: 31446202-31453968 Eucalyptus grandis
Eucgr.I02158 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31452969-31453968 Eucalyptus grandis
Eucgr.I02158 1.0kb downstream 1.0kb downstream 7767 true Chr09: 31445202-31452968 Eucalyptus grandis
Eucgr.I02158 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31445202-31446201 Eucalyptus grandis
Eucgr.I02158 2.0kb upstream 2.0kb upstream 8767 true Chr09: 31446202-31454968 Eucalyptus grandis
Eucgr.I02158 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31452969-31454968 Eucalyptus grandis
Eucgr.I02158 2.0kb downstream 2.0kb downstream 8767 true Chr09: 31444202-31452968 Eucalyptus grandis
Eucgr.I02158 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31444202-31446201 Eucalyptus grandis
Eucgr.I02158 5.0kb upstream 5.0kb upstream 11767 true Chr09: 31446202-31457968 Eucalyptus grandis
Eucgr.I02158 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31452969-31457968 Eucalyptus grandis
Eucgr.I02158 5.0kb downstream 5.0kb downstream 11767 true Chr09: 31441202-31452968 Eucalyptus grandis
Eucgr.I02158 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31441202-31446201 Eucalyptus grandis
Eucgr.I02158 10.0kb upstream 10.0kb upstream 16767 true Chr09: 31446202-31462968 Eucalyptus grandis
Eucgr.I02158 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31452969-31462968 Eucalyptus grandis
Eucgr.I02158 10.0kb downstream 10.0kb downstream 16767 true Chr09: 31436202-31452968 Eucalyptus grandis
Eucgr.I02158 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31436202-31446201 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071086 5270 Rosid View MSA
123740684 5271 Pentapetalae View MSA
122786718 5272 Eudicot View MSA
122047825 5273 Angiosperm View MSA
123428877 5275 Viridiplantae View MSA
121349653 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6877 0.0 46.6215    
cufflinks 14.2648 0.0 37.8941    
cufflinks 24.4434 0.0 60.4099    
cufflinks 19.6663 0.0 52.099    
cufflinks 12.2852 0.0 27.6604   Low
cufflinks 23.7816 0.0 53.9241    

0 Strain