Gene : Eucgr.I02740 E. grandis v2.0
Defline:  (1 of 1) PTHR12832 - TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 Genomic Order:  2317
Name:  ? Eucgr.I02740 Secondary Identifier:  ? PAC:32063921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02740 0.5kb upstream 0.5kb upstream 7640 true Chr09: 38287325-38294964 Eucalyptus grandis
Eucgr.I02740 0.5kb upstream 0.5kb upstream 500 false Chr09: 38294465-38294964 Eucalyptus grandis
Eucgr.I02740 0.5kb downstream 0.5kb downstream 7640 true Chr09: 38286825-38294464 Eucalyptus grandis
Eucgr.I02740 0.5kb downstream 0.5kb downstream 500 false Chr09: 38286825-38287324 Eucalyptus grandis
Eucgr.I02740 1.0kb upstream 1.0kb upstream 8140 true Chr09: 38287325-38295464 Eucalyptus grandis
Eucgr.I02740 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38294465-38295464 Eucalyptus grandis
Eucgr.I02740 1.0kb downstream 1.0kb downstream 8140 true Chr09: 38286325-38294464 Eucalyptus grandis
Eucgr.I02740 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38286325-38287324 Eucalyptus grandis
Eucgr.I02740 2.0kb upstream 2.0kb upstream 9140 true Chr09: 38287325-38296464 Eucalyptus grandis
Eucgr.I02740 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38294465-38296464 Eucalyptus grandis
Eucgr.I02740 2.0kb downstream 2.0kb downstream 9140 true Chr09: 38285325-38294464 Eucalyptus grandis
Eucgr.I02740 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38285325-38287324 Eucalyptus grandis
Eucgr.I02740 5.0kb upstream 5.0kb upstream 12140 true Chr09: 38287325-38299464 Eucalyptus grandis
Eucgr.I02740 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38294465-38299464 Eucalyptus grandis
Eucgr.I02740 5.0kb downstream 5.0kb downstream 12140 true Chr09: 38282325-38294464 Eucalyptus grandis
Eucgr.I02740 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38282325-38287324 Eucalyptus grandis
Eucgr.I02740 10.0kb upstream 10.0kb upstream 17140 true Chr09: 38287325-38304464 Eucalyptus grandis
Eucgr.I02740 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38294465-38304464 Eucalyptus grandis
Eucgr.I02740 10.0kb downstream 10.0kb downstream 17140 true Chr09: 38277325-38294464 Eucalyptus grandis
Eucgr.I02740 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38277325-38287324 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.4896 0.0 124.845 High High
cufflinks 30.0363 0.0 68.4688    
cufflinks 34.3782 0.0 79.1121 High  
cufflinks 15.7543 0.0 34.99    
cufflinks 12.1443 0.0 26.8614   Low
cufflinks 28.3771 0.0 64.2707    

0 Strain