Gene : Eucgr.I02708 E. grandis v2.0
Defline:  (1 of 1) PTHR31234:SF8 - EXPRESSED PROTEIN Genomic Order:  2289
Name:  ? Eucgr.I02708 Secondary Identifier:  ? PAC:32064197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I02708 0.5kb upstream 0.5kb upstream 3583 true Chr09: 38035691-38039273 Eucalyptus grandis
Eucgr.I02708 0.5kb upstream 0.5kb upstream 500 false Chr09: 38038774-38039273 Eucalyptus grandis
Eucgr.I02708 0.5kb downstream 0.5kb downstream 3583 true Chr09: 38035191-38038773 Eucalyptus grandis
Eucgr.I02708 0.5kb downstream 0.5kb downstream 500 false Chr09: 38035191-38035690 Eucalyptus grandis
Eucgr.I02708 1.0kb upstream 1.0kb upstream 4083 true Chr09: 38035691-38039773 Eucalyptus grandis
Eucgr.I02708 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38038774-38039773 Eucalyptus grandis
Eucgr.I02708 1.0kb downstream 1.0kb downstream 4083 true Chr09: 38034691-38038773 Eucalyptus grandis
Eucgr.I02708 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38034691-38035690 Eucalyptus grandis
Eucgr.I02708 2.0kb upstream 2.0kb upstream 5083 true Chr09: 38035691-38040773 Eucalyptus grandis
Eucgr.I02708 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38038774-38040773 Eucalyptus grandis
Eucgr.I02708 2.0kb downstream 2.0kb downstream 5083 true Chr09: 38033691-38038773 Eucalyptus grandis
Eucgr.I02708 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38033691-38035690 Eucalyptus grandis
Eucgr.I02708 5.0kb upstream 5.0kb upstream 8083 true Chr09: 38035691-38043773 Eucalyptus grandis
Eucgr.I02708 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38038774-38043773 Eucalyptus grandis
Eucgr.I02708 5.0kb downstream 5.0kb downstream 8083 true Chr09: 38030691-38038773 Eucalyptus grandis
Eucgr.I02708 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38030691-38035690 Eucalyptus grandis
Eucgr.I02708 10.0kb upstream 10.0kb upstream 13083 true Chr09: 38035691-38048773 Eucalyptus grandis
Eucgr.I02708 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38038774-38048773 Eucalyptus grandis
Eucgr.I02708 10.0kb downstream 10.0kb downstream 13083 true Chr09: 38025691-38038773 Eucalyptus grandis
Eucgr.I02708 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38025691-38035690 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067884 5270 Rosid View MSA
123745093 5271 Pentapetalae View MSA
122786322 5272 Eudicot View MSA
122042792 5273 Angiosperm View MSA
121350996 5274 Embryophyte View MSA
123381963 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.011 0.0 23.6914    
cufflinks 20.7753 0.0 46.8675    
cufflinks 10.3039 0.0 24.4876    
cufflinks 23.2583 0.0 52.199   High
cufflinks 19.606 0.0 44.2324    
cufflinks 8.14502 0.0 19.6251   Low

0 Strain