Gene : Eucgr.J00325 E. grandis v2.0
Defline:  (1 of 2) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  283
Name:  ? Eucgr.J00325 Secondary Identifier:  ? PAC:32035711
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00325 0.5kb upstream 0.5kb upstream 4857 true Chr10: 3258044-3262900 Eucalyptus grandis
Eucgr.J00325 0.5kb upstream 0.5kb upstream 500 false Chr10: 3262401-3262900 Eucalyptus grandis
Eucgr.J00325 0.5kb downstream 0.5kb downstream 4857 true Chr10: 3257544-3262400 Eucalyptus grandis
Eucgr.J00325 0.5kb downstream 0.5kb downstream 500 false Chr10: 3257544-3258043 Eucalyptus grandis
Eucgr.J00325 1.0kb upstream 1.0kb upstream 5357 true Chr10: 3258044-3263400 Eucalyptus grandis
Eucgr.J00325 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3262401-3263400 Eucalyptus grandis
Eucgr.J00325 1.0kb downstream 1.0kb downstream 5357 true Chr10: 3257044-3262400 Eucalyptus grandis
Eucgr.J00325 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3257044-3258043 Eucalyptus grandis
Eucgr.J00325 2.0kb upstream 2.0kb upstream 6357 true Chr10: 3258044-3264400 Eucalyptus grandis
Eucgr.J00325 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3262401-3264400 Eucalyptus grandis
Eucgr.J00325 2.0kb downstream 2.0kb downstream 6357 true Chr10: 3256044-3262400 Eucalyptus grandis
Eucgr.J00325 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3256044-3258043 Eucalyptus grandis
Eucgr.J00325 5.0kb upstream 5.0kb upstream 9357 true Chr10: 3258044-3267400 Eucalyptus grandis
Eucgr.J00325 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3262401-3267400 Eucalyptus grandis
Eucgr.J00325 5.0kb downstream 5.0kb downstream 9357 true Chr10: 3253044-3262400 Eucalyptus grandis
Eucgr.J00325 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3253044-3258043 Eucalyptus grandis
Eucgr.J00325 10.0kb upstream 10.0kb upstream 14357 true Chr10: 3258044-3272400 Eucalyptus grandis
Eucgr.J00325 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3262401-3272400 Eucalyptus grandis
Eucgr.J00325 10.0kb downstream 10.0kb downstream 14357 true Chr10: 3248044-3262400 Eucalyptus grandis
Eucgr.J00325 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3248044-3258043 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282083 0.0 0.960187 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.58798 0.0 4.39244   High
cufflinks 0.251314 0.0 0.862949 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.431193 0.0 1.38675 Low  

0 Strain