Gene : Eucgr.J00305 E. grandis v2.0
Defline:  (1 of 1) 3.6.3.23 - Oligopeptide-transporting ATPase / Oligopeptide permease Genomic Order:  265
Name:  ? Eucgr.J00305 Secondary Identifier:  ? PAC:32032282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00305 0.5kb upstream 0.5kb upstream 6785 true Chr10: 3108256-3115040 Eucalyptus grandis
Eucgr.J00305 0.5kb upstream 0.5kb upstream 500 false Chr10: 3114541-3115040 Eucalyptus grandis
Eucgr.J00305 0.5kb downstream 0.5kb downstream 6785 true Chr10: 3107756-3114540 Eucalyptus grandis
Eucgr.J00305 0.5kb downstream 0.5kb downstream 500 false Chr10: 3107756-3108255 Eucalyptus grandis
Eucgr.J00305 1.0kb upstream 1.0kb upstream 7285 true Chr10: 3108256-3115540 Eucalyptus grandis
Eucgr.J00305 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3114541-3115540 Eucalyptus grandis
Eucgr.J00305 1.0kb downstream 1.0kb downstream 7285 true Chr10: 3107256-3114540 Eucalyptus grandis
Eucgr.J00305 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3107256-3108255 Eucalyptus grandis
Eucgr.J00305 2.0kb upstream 2.0kb upstream 8285 true Chr10: 3108256-3116540 Eucalyptus grandis
Eucgr.J00305 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3114541-3116540 Eucalyptus grandis
Eucgr.J00305 2.0kb downstream 2.0kb downstream 8285 true Chr10: 3106256-3114540 Eucalyptus grandis
Eucgr.J00305 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3106256-3108255 Eucalyptus grandis
Eucgr.J00305 5.0kb upstream 5.0kb upstream 11285 true Chr10: 3108256-3119540 Eucalyptus grandis
Eucgr.J00305 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3114541-3119540 Eucalyptus grandis
Eucgr.J00305 5.0kb downstream 5.0kb downstream 11285 true Chr10: 3103256-3114540 Eucalyptus grandis
Eucgr.J00305 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3103256-3108255 Eucalyptus grandis
Eucgr.J00305 10.0kb upstream 10.0kb upstream 16285 true Chr10: 3108256-3124540 Eucalyptus grandis
Eucgr.J00305 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3114541-3124540 Eucalyptus grandis
Eucgr.J00305 10.0kb downstream 10.0kb downstream 16285 true Chr10: 3098256-3114540 Eucalyptus grandis
Eucgr.J00305 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3098256-3108255 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064289 5270 Rosid View MSA
123737216 5271 Pentapetalae View MSA
122791638 5272 Eudicot View MSA
122043551 5273 Angiosperm View MSA
121344782 5274 Embryophyte View MSA
123425394 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5682 0.0 28.9221    
cufflinks 6.44144 0.0 15.9586    
cufflinks 8.99477 0.0 28.3923    
cufflinks 5.94015 0.0 14.8211    
cufflinks 2.92437 0.0 8.25596   Low
cufflinks 22.585 0.0 63.2978   High

0 Strain