Gene : Eucgr.J00270 E. grandis v2.0
Defline:  (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  237
Name:  ? Eucgr.J00270 Secondary Identifier:  ? PAC:32035175
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6124 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00270 0.5kb upstream 0.5kb upstream 8344 true Chr10: 2815182-2823525 Eucalyptus grandis
Eucgr.J00270 0.5kb upstream 0.5kb upstream 500 false Chr10: 2823026-2823525 Eucalyptus grandis
Eucgr.J00270 0.5kb downstream 0.5kb downstream 8344 true Chr10: 2814682-2823025 Eucalyptus grandis
Eucgr.J00270 0.5kb downstream 0.5kb downstream 500 false Chr10: 2814682-2815181 Eucalyptus grandis
Eucgr.J00270 1.0kb upstream 1.0kb upstream 8844 true Chr10: 2815182-2824025 Eucalyptus grandis
Eucgr.J00270 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2823026-2824025 Eucalyptus grandis
Eucgr.J00270 1.0kb downstream 1.0kb downstream 8844 true Chr10: 2814182-2823025 Eucalyptus grandis
Eucgr.J00270 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2814182-2815181 Eucalyptus grandis
Eucgr.J00270 2.0kb upstream 2.0kb upstream 9844 true Chr10: 2815182-2825025 Eucalyptus grandis
Eucgr.J00270 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2823026-2825025 Eucalyptus grandis
Eucgr.J00270 2.0kb downstream 2.0kb downstream 9844 true Chr10: 2813182-2823025 Eucalyptus grandis
Eucgr.J00270 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2813182-2815181 Eucalyptus grandis
Eucgr.J00270 5.0kb upstream 5.0kb upstream 12844 true Chr10: 2815182-2828025 Eucalyptus grandis
Eucgr.J00270 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2823026-2828025 Eucalyptus grandis
Eucgr.J00270 5.0kb downstream 5.0kb downstream 12844 true Chr10: 2810182-2823025 Eucalyptus grandis
Eucgr.J00270 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2810182-2815181 Eucalyptus grandis
Eucgr.J00270 10.0kb upstream 10.0kb upstream 17844 true Chr10: 2815182-2833025 Eucalyptus grandis
Eucgr.J00270 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2823026-2833025 Eucalyptus grandis
Eucgr.J00270 10.0kb downstream 10.0kb downstream 17844 true Chr10: 2805182-2823025 Eucalyptus grandis
Eucgr.J00270 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2805182-2815181 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.19397 0.0 24.2199    
cufflinks 10.5243 0.0 26.7541    
cufflinks 0.488199 0.0 1.67805 Low Low
cufflinks 2.31174 0.0 6.02897    
cufflinks 6.45213 0.0 14.8615    
cufflinks 14.013 0.0 31.6287    

0 Strain