Gene : Eucgr.J00236 E. grandis v2.0
Defline:  (1 of 2) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  208
Name:  ? Eucgr.J00236 Secondary Identifier:  ? PAC:32035493
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00236 0.5kb upstream 0.5kb upstream 2507 true Chr10: 2439009-2441515 Eucalyptus grandis
Eucgr.J00236 0.5kb upstream 0.5kb upstream 500 false Chr10: 2439009-2439508 Eucalyptus grandis
Eucgr.J00236 0.5kb downstream 0.5kb downstream 2507 true Chr10: 2439509-2442015 Eucalyptus grandis
Eucgr.J00236 0.5kb downstream 0.5kb downstream 500 false Chr10: 2441516-2442015 Eucalyptus grandis
Eucgr.J00236 1.0kb upstream 1.0kb upstream 3007 true Chr10: 2438509-2441515 Eucalyptus grandis
Eucgr.J00236 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2438509-2439508 Eucalyptus grandis
Eucgr.J00236 1.0kb downstream 1.0kb downstream 3007 true Chr10: 2439509-2442515 Eucalyptus grandis
Eucgr.J00236 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2441516-2442515 Eucalyptus grandis
Eucgr.J00236 2.0kb upstream 2.0kb upstream 4007 true Chr10: 2437509-2441515 Eucalyptus grandis
Eucgr.J00236 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2437509-2439508 Eucalyptus grandis
Eucgr.J00236 2.0kb downstream 2.0kb downstream 4007 true Chr10: 2439509-2443515 Eucalyptus grandis
Eucgr.J00236 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2441516-2443515 Eucalyptus grandis
Eucgr.J00236 5.0kb upstream 5.0kb upstream 7007 true Chr10: 2434509-2441515 Eucalyptus grandis
Eucgr.J00236 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2434509-2439508 Eucalyptus grandis
Eucgr.J00236 5.0kb downstream 5.0kb downstream 7007 true Chr10: 2439509-2446515 Eucalyptus grandis
Eucgr.J00236 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2441516-2446515 Eucalyptus grandis
Eucgr.J00236 10.0kb upstream 10.0kb upstream 12007 true Chr10: 2429509-2441515 Eucalyptus grandis
Eucgr.J00236 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2429509-2439508 Eucalyptus grandis
Eucgr.J00236 10.0kb downstream 10.0kb downstream 12007 true Chr10: 2439509-2451515 Eucalyptus grandis
Eucgr.J00236 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2441516-2451515 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.9905 0.0 171.042 High Low
cufflinks 189.819 0.0 464.5 High  
cufflinks 109.58 0.0 254.633 High  
cufflinks 228.498 0.0 568.839 High  
cufflinks 482.0 0.0 1347.95 High High
cufflinks 90.9108 0.0 211.842 High  

0 Strain