Gene : Eucgr.J00145 E. grandis v2.0
Defline:  (1 of 76) PF00892 - EamA-like transporter family (EamA) Genomic Order:  127
Name:  ? Eucgr.J00145 Secondary Identifier:  ? PAC:32034800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00145 0.5kb upstream 0.5kb upstream 2797 true Chr10: 1651929-1654725 Eucalyptus grandis
Eucgr.J00145 0.5kb upstream 0.5kb upstream 500 false Chr10: 1651929-1652428 Eucalyptus grandis
Eucgr.J00145 0.5kb downstream 0.5kb downstream 2797 true Chr10: 1652429-1655225 Eucalyptus grandis
Eucgr.J00145 0.5kb downstream 0.5kb downstream 500 false Chr10: 1654726-1655225 Eucalyptus grandis
Eucgr.J00145 1.0kb upstream 1.0kb upstream 3297 true Chr10: 1651429-1654725 Eucalyptus grandis
Eucgr.J00145 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1651429-1652428 Eucalyptus grandis
Eucgr.J00145 1.0kb downstream 1.0kb downstream 3297 true Chr10: 1652429-1655725 Eucalyptus grandis
Eucgr.J00145 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1654726-1655725 Eucalyptus grandis
Eucgr.J00145 2.0kb upstream 2.0kb upstream 4297 true Chr10: 1650429-1654725 Eucalyptus grandis
Eucgr.J00145 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1650429-1652428 Eucalyptus grandis
Eucgr.J00145 2.0kb downstream 2.0kb downstream 4297 true Chr10: 1652429-1656725 Eucalyptus grandis
Eucgr.J00145 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1654726-1656725 Eucalyptus grandis
Eucgr.J00145 5.0kb upstream 5.0kb upstream 7297 true Chr10: 1647429-1654725 Eucalyptus grandis
Eucgr.J00145 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1647429-1652428 Eucalyptus grandis
Eucgr.J00145 5.0kb downstream 5.0kb downstream 7297 true Chr10: 1652429-1659725 Eucalyptus grandis
Eucgr.J00145 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1654726-1659725 Eucalyptus grandis
Eucgr.J00145 10.0kb upstream 10.0kb upstream 12297 true Chr10: 1642429-1654725 Eucalyptus grandis
Eucgr.J00145 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1642429-1652428 Eucalyptus grandis
Eucgr.J00145 10.0kb downstream 10.0kb downstream 12297 true Chr10: 1652429-1664725 Eucalyptus grandis
Eucgr.J00145 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1654726-1664725 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673037 5273 Angiosperm View MSA
124072839 5270 Rosid View MSA
123628206 5271 Pentapetalae View MSA
122662495 5272 Eudicot View MSA
120944939 5274 Embryophyte View MSA
122985345 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.50602 0.0 4.56112    
cufflinks 2.58566 0.0 7.32296    
cufflinks 2.33581 0.0 6.72555    
cufflinks 0.27099 0.0 1.02102 Low Low
cufflinks 0.608424 0.0 2.05974 Low  
cufflinks 1.9186 0.0 5.67248    

0 Strain