Gene : Eucgr.J00068 E. grandis v2.0
Defline:  (1 of 1) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  57
Name:  ? Eucgr.J00068 Secondary Identifier:  ? PAC:32033752
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00068 0.5kb upstream 0.5kb upstream 4111 true Chr10: 1041090-1045200 Eucalyptus grandis
Eucgr.J00068 0.5kb upstream 0.5kb upstream 500 false Chr10: 1041090-1041589 Eucalyptus grandis
Eucgr.J00068 0.5kb downstream 0.5kb downstream 4111 true Chr10: 1041590-1045700 Eucalyptus grandis
Eucgr.J00068 0.5kb downstream 0.5kb downstream 500 false Chr10: 1045201-1045700 Eucalyptus grandis
Eucgr.J00068 1.0kb upstream 1.0kb upstream 4611 true Chr10: 1040590-1045200 Eucalyptus grandis
Eucgr.J00068 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1040590-1041589 Eucalyptus grandis
Eucgr.J00068 1.0kb downstream 1.0kb downstream 4611 true Chr10: 1041590-1046200 Eucalyptus grandis
Eucgr.J00068 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1045201-1046200 Eucalyptus grandis
Eucgr.J00068 2.0kb upstream 2.0kb upstream 5611 true Chr10: 1039590-1045200 Eucalyptus grandis
Eucgr.J00068 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1039590-1041589 Eucalyptus grandis
Eucgr.J00068 2.0kb downstream 2.0kb downstream 5611 true Chr10: 1041590-1047200 Eucalyptus grandis
Eucgr.J00068 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1045201-1047200 Eucalyptus grandis
Eucgr.J00068 5.0kb upstream 5.0kb upstream 8611 true Chr10: 1036590-1045200 Eucalyptus grandis
Eucgr.J00068 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1036590-1041589 Eucalyptus grandis
Eucgr.J00068 5.0kb downstream 5.0kb downstream 8611 true Chr10: 1041590-1050200 Eucalyptus grandis
Eucgr.J00068 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1045201-1050200 Eucalyptus grandis
Eucgr.J00068 10.0kb upstream 10.0kb upstream 13611 true Chr10: 1031590-1045200 Eucalyptus grandis
Eucgr.J00068 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1031590-1041589 Eucalyptus grandis
Eucgr.J00068 10.0kb downstream 10.0kb downstream 13611 true Chr10: 1041590-1055200 Eucalyptus grandis
Eucgr.J00068 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1045201-1055200 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44197 0.0 4.20179    
cufflinks 0.346892 0.0 1.28745 Low  
cufflinks 1.61371 0.0 4.66842    
cufflinks 0.216086 0.0 0.908437 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.57729 0.0 4.5901    

0 Strain