Gene : Eucgr.J00639 E. grandis v2.0
Defline:  (1 of 4) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  562
Name:  ? Eucgr.J00639 Secondary Identifier:  ? PAC:32034655
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00639 0.5kb upstream 0.5kb upstream 3854 true Chr10: 7010596-7014449 Eucalyptus grandis
Eucgr.J00639 0.5kb upstream 0.5kb upstream 500 false Chr10: 7010596-7011095 Eucalyptus grandis
Eucgr.J00639 0.5kb downstream 0.5kb downstream 3854 true Chr10: 7011096-7014949 Eucalyptus grandis
Eucgr.J00639 0.5kb downstream 0.5kb downstream 500 false Chr10: 7014450-7014949 Eucalyptus grandis
Eucgr.J00639 1.0kb upstream 1.0kb upstream 4354 true Chr10: 7010096-7014449 Eucalyptus grandis
Eucgr.J00639 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7010096-7011095 Eucalyptus grandis
Eucgr.J00639 1.0kb downstream 1.0kb downstream 4354 true Chr10: 7011096-7015449 Eucalyptus grandis
Eucgr.J00639 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7014450-7015449 Eucalyptus grandis
Eucgr.J00639 2.0kb upstream 2.0kb upstream 5354 true Chr10: 7009096-7014449 Eucalyptus grandis
Eucgr.J00639 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7009096-7011095 Eucalyptus grandis
Eucgr.J00639 2.0kb downstream 2.0kb downstream 5354 true Chr10: 7011096-7016449 Eucalyptus grandis
Eucgr.J00639 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7014450-7016449 Eucalyptus grandis
Eucgr.J00639 5.0kb upstream 5.0kb upstream 8354 true Chr10: 7006096-7014449 Eucalyptus grandis
Eucgr.J00639 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7006096-7011095 Eucalyptus grandis
Eucgr.J00639 5.0kb downstream 5.0kb downstream 8354 true Chr10: 7011096-7019449 Eucalyptus grandis
Eucgr.J00639 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7014450-7019449 Eucalyptus grandis
Eucgr.J00639 10.0kb upstream 10.0kb upstream 13354 true Chr10: 7001096-7014449 Eucalyptus grandis
Eucgr.J00639 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7001096-7011095 Eucalyptus grandis
Eucgr.J00639 10.0kb downstream 10.0kb downstream 13354 true Chr10: 7011096-7024449 Eucalyptus grandis
Eucgr.J00639 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7014450-7024449 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.4982 0.0 93.9933 High  
cufflinks 20.0518 0.0 45.2353    
cufflinks 30.7462 0.0 68.3519 High  
cufflinks 10.0701 0.0 23.9986   Low
cufflinks 20.4013 0.0 46.0759    
cufflinks 52.3344 0.0 115.882 High High

0 Strain