Gene : Eucgr.J00615 E. grandis v2.0
Defline:  (1 of 2) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  539
Name:  ? Eucgr.J00615 Secondary Identifier:  ? PAC:32032874
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00615 0.5kb upstream 0.5kb upstream 3641 true Chr10: 6850713-6854353 Eucalyptus grandis
Eucgr.J00615 0.5kb upstream 0.5kb upstream 500 false Chr10: 6850713-6851212 Eucalyptus grandis
Eucgr.J00615 0.5kb downstream 0.5kb downstream 3641 true Chr10: 6851213-6854853 Eucalyptus grandis
Eucgr.J00615 0.5kb downstream 0.5kb downstream 500 false Chr10: 6854354-6854853 Eucalyptus grandis
Eucgr.J00615 1.0kb upstream 1.0kb upstream 4141 true Chr10: 6850213-6854353 Eucalyptus grandis
Eucgr.J00615 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6850213-6851212 Eucalyptus grandis
Eucgr.J00615 1.0kb downstream 1.0kb downstream 4141 true Chr10: 6851213-6855353 Eucalyptus grandis
Eucgr.J00615 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6854354-6855353 Eucalyptus grandis
Eucgr.J00615 2.0kb upstream 2.0kb upstream 5141 true Chr10: 6849213-6854353 Eucalyptus grandis
Eucgr.J00615 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6849213-6851212 Eucalyptus grandis
Eucgr.J00615 2.0kb downstream 2.0kb downstream 5141 true Chr10: 6851213-6856353 Eucalyptus grandis
Eucgr.J00615 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6854354-6856353 Eucalyptus grandis
Eucgr.J00615 5.0kb upstream 5.0kb upstream 8141 true Chr10: 6846213-6854353 Eucalyptus grandis
Eucgr.J00615 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6846213-6851212 Eucalyptus grandis
Eucgr.J00615 5.0kb downstream 5.0kb downstream 8141 true Chr10: 6851213-6859353 Eucalyptus grandis
Eucgr.J00615 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6854354-6859353 Eucalyptus grandis
Eucgr.J00615 10.0kb upstream 10.0kb upstream 13141 true Chr10: 6841213-6854353 Eucalyptus grandis
Eucgr.J00615 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6841213-6851212 Eucalyptus grandis
Eucgr.J00615 10.0kb downstream 10.0kb downstream 13141 true Chr10: 6851213-6864353 Eucalyptus grandis
Eucgr.J00615 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6854354-6864353 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4278 0.0 43.7363    
cufflinks 26.6484 0.0 59.8327    
cufflinks 14.5502 0.0 33.4616    
cufflinks 26.1189 0.0 58.7653    
cufflinks 12.2667 0.0 29.2514   Low
cufflinks 31.2325 0.0 69.9773   High

0 Strain