Gene : Eucgr.J00538 E. grandis v2.0
Defline:  (1 of 2) KOG4526 - Predicted membrane protein Genomic Order:  474
Name:  ? Eucgr.J00538 Secondary Identifier:  ? PAC:32032676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00538 0.5kb upstream 0.5kb upstream 2300 true Chr10: 5927771-5930070 Eucalyptus grandis
Eucgr.J00538 0.5kb upstream 0.5kb upstream 500 false Chr10: 5927771-5928270 Eucalyptus grandis
Eucgr.J00538 0.5kb downstream 0.5kb downstream 2300 true Chr10: 5928271-5930570 Eucalyptus grandis
Eucgr.J00538 0.5kb downstream 0.5kb downstream 500 false Chr10: 5930071-5930570 Eucalyptus grandis
Eucgr.J00538 1.0kb upstream 1.0kb upstream 2800 true Chr10: 5927271-5930070 Eucalyptus grandis
Eucgr.J00538 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5927271-5928270 Eucalyptus grandis
Eucgr.J00538 1.0kb downstream 1.0kb downstream 2800 true Chr10: 5928271-5931070 Eucalyptus grandis
Eucgr.J00538 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5930071-5931070 Eucalyptus grandis
Eucgr.J00538 2.0kb upstream 2.0kb upstream 3800 true Chr10: 5926271-5930070 Eucalyptus grandis
Eucgr.J00538 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5926271-5928270 Eucalyptus grandis
Eucgr.J00538 2.0kb downstream 2.0kb downstream 3800 true Chr10: 5928271-5932070 Eucalyptus grandis
Eucgr.J00538 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5930071-5932070 Eucalyptus grandis
Eucgr.J00538 5.0kb upstream 5.0kb upstream 6800 true Chr10: 5923271-5930070 Eucalyptus grandis
Eucgr.J00538 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5923271-5928270 Eucalyptus grandis
Eucgr.J00538 5.0kb downstream 5.0kb downstream 6800 true Chr10: 5928271-5935070 Eucalyptus grandis
Eucgr.J00538 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5930071-5935070 Eucalyptus grandis
Eucgr.J00538 10.0kb upstream 10.0kb upstream 11800 true Chr10: 5918271-5930070 Eucalyptus grandis
Eucgr.J00538 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5918271-5928270 Eucalyptus grandis
Eucgr.J00538 10.0kb downstream 10.0kb downstream 11800 true Chr10: 5928271-5940070 Eucalyptus grandis
Eucgr.J00538 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5930071-5940070 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066079 5270 Rosid View MSA
123739162 5271 Pentapetalae View MSA
122786877 5272 Eudicot View MSA
122046265 5273 Angiosperm View MSA
121346382 5274 Embryophyte View MSA
123424955 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4397 0.0 24.7465    
cufflinks 0.559899 0.0 1.80257 Low Low
cufflinks 7.30441 0.0 17.9331    
cufflinks 0.52868 0.0 1.71946   Low
cufflinks 3.09707 0.0 8.25533    
cufflinks 21.9325 0.0 49.3185   High

0 Strain