Gene : Eucgr.J00501 E. grandis v2.0
Defline:  (1 of 1) PTHR23177//PTHR23177:SF26 - MKIAA1688 PROTEIN Genomic Order:  439
Name:  ? Eucgr.J00501 Secondary Identifier:  ? PAC:32032687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00501 0.5kb upstream 0.5kb upstream 5151 true Chr10: 5356863-5362013 Eucalyptus grandis
Eucgr.J00501 0.5kb upstream 0.5kb upstream 500 false Chr10: 5361514-5362013 Eucalyptus grandis
Eucgr.J00501 0.5kb downstream 0.5kb downstream 5151 true Chr10: 5356363-5361513 Eucalyptus grandis
Eucgr.J00501 0.5kb downstream 0.5kb downstream 500 false Chr10: 5356363-5356862 Eucalyptus grandis
Eucgr.J00501 1.0kb upstream 1.0kb upstream 5651 true Chr10: 5356863-5362513 Eucalyptus grandis
Eucgr.J00501 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5361514-5362513 Eucalyptus grandis
Eucgr.J00501 1.0kb downstream 1.0kb downstream 5651 true Chr10: 5355863-5361513 Eucalyptus grandis
Eucgr.J00501 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5355863-5356862 Eucalyptus grandis
Eucgr.J00501 2.0kb upstream 2.0kb upstream 6651 true Chr10: 5356863-5363513 Eucalyptus grandis
Eucgr.J00501 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5361514-5363513 Eucalyptus grandis
Eucgr.J00501 2.0kb downstream 2.0kb downstream 6651 true Chr10: 5354863-5361513 Eucalyptus grandis
Eucgr.J00501 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5354863-5356862 Eucalyptus grandis
Eucgr.J00501 5.0kb upstream 5.0kb upstream 9651 true Chr10: 5356863-5366513 Eucalyptus grandis
Eucgr.J00501 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5361514-5366513 Eucalyptus grandis
Eucgr.J00501 5.0kb downstream 5.0kb downstream 9651 true Chr10: 5351863-5361513 Eucalyptus grandis
Eucgr.J00501 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5351863-5356862 Eucalyptus grandis
Eucgr.J00501 10.0kb upstream 10.0kb upstream 14651 true Chr10: 5356863-5371513 Eucalyptus grandis
Eucgr.J00501 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5361514-5371513 Eucalyptus grandis
Eucgr.J00501 10.0kb downstream 10.0kb downstream 14651 true Chr10: 5346863-5361513 Eucalyptus grandis
Eucgr.J00501 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5346863-5356862 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7566 0.0 43.755    
cufflinks 25.341 0.0 56.0437    
cufflinks 15.2652 0.0 34.0035   Low
cufflinks 38.7485 0.0 86.2653 High High
cufflinks 38.241 0.0 85.0474 High High
cufflinks 22.8495 0.0 50.5363    

0 Strain