Gene : Eucgr.J00445 E. grandis v2.0
Defline:  (1 of 2) PTHR11088:SF26 - TRNA DIMETHYLALLYLTRANSFERASE 2 Genomic Order:  389
Name:  ? Eucgr.J00445 Secondary Identifier:  ? PAC:32033203
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2781 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00445 0.5kb upstream 0.5kb upstream 5205 true Chr10: 4767110-4772314 Eucalyptus grandis
Eucgr.J00445 0.5kb upstream 0.5kb upstream 500 false Chr10: 4771815-4772314 Eucalyptus grandis
Eucgr.J00445 0.5kb downstream 0.5kb downstream 5205 true Chr10: 4766610-4771814 Eucalyptus grandis
Eucgr.J00445 0.5kb downstream 0.5kb downstream 500 false Chr10: 4766610-4767109 Eucalyptus grandis
Eucgr.J00445 1.0kb upstream 1.0kb upstream 5705 true Chr10: 4767110-4772814 Eucalyptus grandis
Eucgr.J00445 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4771815-4772814 Eucalyptus grandis
Eucgr.J00445 1.0kb downstream 1.0kb downstream 5705 true Chr10: 4766110-4771814 Eucalyptus grandis
Eucgr.J00445 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4766110-4767109 Eucalyptus grandis
Eucgr.J00445 2.0kb upstream 2.0kb upstream 6705 true Chr10: 4767110-4773814 Eucalyptus grandis
Eucgr.J00445 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4771815-4773814 Eucalyptus grandis
Eucgr.J00445 2.0kb downstream 2.0kb downstream 6705 true Chr10: 4765110-4771814 Eucalyptus grandis
Eucgr.J00445 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4765110-4767109 Eucalyptus grandis
Eucgr.J00445 5.0kb upstream 5.0kb upstream 9705 true Chr10: 4767110-4776814 Eucalyptus grandis
Eucgr.J00445 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4771815-4776814 Eucalyptus grandis
Eucgr.J00445 5.0kb downstream 5.0kb downstream 9705 true Chr10: 4762110-4771814 Eucalyptus grandis
Eucgr.J00445 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4762110-4767109 Eucalyptus grandis
Eucgr.J00445 10.0kb upstream 10.0kb upstream 14705 true Chr10: 4767110-4781814 Eucalyptus grandis
Eucgr.J00445 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4771815-4781814 Eucalyptus grandis
Eucgr.J00445 10.0kb downstream 10.0kb downstream 14705 true Chr10: 4757110-4771814 Eucalyptus grandis
Eucgr.J00445 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4757110-4767109 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.58624 0.0 20.3896   High
cufflinks 3.26304 0.0 8.49513   Low
cufflinks 7.45057 0.0 17.8923    
cufflinks 3.68751 0.0 9.48169    
cufflinks 3.32258 0.0 8.66765    
cufflinks 7.10277 0.0 17.234    

0 Strain