Gene : Eucgr.J01028 E. grandis v2.0
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  906
Name:  ? Eucgr.J01028 Secondary Identifier:  ? PAC:32034139
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5173 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PYRUVDEHYD-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01028 0.5kb upstream 0.5kb upstream 11894 true Chr10: 11224380-11236273 Eucalyptus grandis
Eucgr.J01028 0.5kb upstream 0.5kb upstream 500 false Chr10: 11235774-11236273 Eucalyptus grandis
Eucgr.J01028 0.5kb downstream 0.5kb downstream 11894 true Chr10: 11223880-11235773 Eucalyptus grandis
Eucgr.J01028 0.5kb downstream 0.5kb downstream 500 false Chr10: 11223880-11224379 Eucalyptus grandis
Eucgr.J01028 1.0kb upstream 1.0kb upstream 12394 true Chr10: 11224380-11236773 Eucalyptus grandis
Eucgr.J01028 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11235774-11236773 Eucalyptus grandis
Eucgr.J01028 1.0kb downstream 1.0kb downstream 12394 true Chr10: 11223380-11235773 Eucalyptus grandis
Eucgr.J01028 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11223380-11224379 Eucalyptus grandis
Eucgr.J01028 2.0kb upstream 2.0kb upstream 13394 true Chr10: 11224380-11237773 Eucalyptus grandis
Eucgr.J01028 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11235774-11237773 Eucalyptus grandis
Eucgr.J01028 2.0kb downstream 2.0kb downstream 13394 true Chr10: 11222380-11235773 Eucalyptus grandis
Eucgr.J01028 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11222380-11224379 Eucalyptus grandis
Eucgr.J01028 5.0kb upstream 5.0kb upstream 16394 true Chr10: 11224380-11240773 Eucalyptus grandis
Eucgr.J01028 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11235774-11240773 Eucalyptus grandis
Eucgr.J01028 5.0kb downstream 5.0kb downstream 16394 true Chr10: 11219380-11235773 Eucalyptus grandis
Eucgr.J01028 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11219380-11224379 Eucalyptus grandis
Eucgr.J01028 10.0kb upstream 10.0kb upstream 21394 true Chr10: 11224380-11245773 Eucalyptus grandis
Eucgr.J01028 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11235774-11245773 Eucalyptus grandis
Eucgr.J01028 10.0kb downstream 10.0kb downstream 21394 true Chr10: 11214380-11235773 Eucalyptus grandis
Eucgr.J01028 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11214380-11224379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.2923 0.0 18.7463    
cufflinks 17.7611 0.0 39.2775   High
cufflinks 6.55634 0.0 14.9854    
cufflinks 10.1071 0.0 22.5438    
cufflinks 5.50247 0.0 12.7274    
cufflinks 5.57184 0.0 13.0194    

0 Strain