Gene : Eucgr.J00869 E. grandis v2.0
Defline:  (1 of 8) PF01966 - HD domain (HD) Genomic Order:  763
Name:  ? Eucgr.J00869 Secondary Identifier:  ? PAC:32034209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00869 0.5kb upstream 0.5kb upstream 4187 true Chr10: 9354999-9359185 Eucalyptus grandis
Eucgr.J00869 0.5kb upstream 0.5kb upstream 500 false Chr10: 9354999-9355498 Eucalyptus grandis
Eucgr.J00869 0.5kb downstream 0.5kb downstream 4187 true Chr10: 9355499-9359685 Eucalyptus grandis
Eucgr.J00869 0.5kb downstream 0.5kb downstream 500 false Chr10: 9359186-9359685 Eucalyptus grandis
Eucgr.J00869 1.0kb upstream 1.0kb upstream 4687 true Chr10: 9354499-9359185 Eucalyptus grandis
Eucgr.J00869 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9354499-9355498 Eucalyptus grandis
Eucgr.J00869 1.0kb downstream 1.0kb downstream 4687 true Chr10: 9355499-9360185 Eucalyptus grandis
Eucgr.J00869 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9359186-9360185 Eucalyptus grandis
Eucgr.J00869 2.0kb upstream 2.0kb upstream 5687 true Chr10: 9353499-9359185 Eucalyptus grandis
Eucgr.J00869 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9353499-9355498 Eucalyptus grandis
Eucgr.J00869 2.0kb downstream 2.0kb downstream 5687 true Chr10: 9355499-9361185 Eucalyptus grandis
Eucgr.J00869 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9359186-9361185 Eucalyptus grandis
Eucgr.J00869 5.0kb upstream 5.0kb upstream 8687 true Chr10: 9350499-9359185 Eucalyptus grandis
Eucgr.J00869 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9350499-9355498 Eucalyptus grandis
Eucgr.J00869 5.0kb downstream 5.0kb downstream 8687 true Chr10: 9355499-9364185 Eucalyptus grandis
Eucgr.J00869 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9359186-9364185 Eucalyptus grandis
Eucgr.J00869 10.0kb upstream 10.0kb upstream 13687 true Chr10: 9345499-9359185 Eucalyptus grandis
Eucgr.J00869 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9345499-9355498 Eucalyptus grandis
Eucgr.J00869 10.0kb downstream 10.0kb downstream 13687 true Chr10: 9355499-9369185 Eucalyptus grandis
Eucgr.J00869 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9359186-9369185 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068985 5270 Rosid View MSA
123739075 5271 Pentapetalae View MSA
122790002 5272 Eudicot View MSA
122047991 5273 Angiosperm View MSA
121346124 5274 Embryophyte View MSA
123423985 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.47379 0.0 20.2292   High
cufflinks 2.97868 0.0 8.31152   Low
cufflinks 5.37661 0.0 16.2738    
cufflinks 3.93617 0.0 10.5392    
cufflinks 6.09302 0.0 15.3325    
cufflinks 6.74189 0.0 20.0501    

0 Strain