Gene : Eucgr.J00781 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  687
Name:  ? Eucgr.J00781 Secondary Identifier:  ? PAC:32034275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00781 0.5kb upstream 0.5kb upstream 2036 true Chr10: 8271355-8273390 Eucalyptus grandis
Eucgr.J00781 0.5kb upstream 0.5kb upstream 500 false Chr10: 8272891-8273390 Eucalyptus grandis
Eucgr.J00781 0.5kb downstream 0.5kb downstream 2036 true Chr10: 8270855-8272890 Eucalyptus grandis
Eucgr.J00781 0.5kb downstream 0.5kb downstream 500 false Chr10: 8270855-8271354 Eucalyptus grandis
Eucgr.J00781 1.0kb upstream 1.0kb upstream 2536 true Chr10: 8271355-8273890 Eucalyptus grandis
Eucgr.J00781 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8272891-8273890 Eucalyptus grandis
Eucgr.J00781 1.0kb downstream 1.0kb downstream 2536 true Chr10: 8270355-8272890 Eucalyptus grandis
Eucgr.J00781 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8270355-8271354 Eucalyptus grandis
Eucgr.J00781 2.0kb upstream 2.0kb upstream 3536 true Chr10: 8271355-8274890 Eucalyptus grandis
Eucgr.J00781 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8272891-8274890 Eucalyptus grandis
Eucgr.J00781 2.0kb downstream 2.0kb downstream 3536 true Chr10: 8269355-8272890 Eucalyptus grandis
Eucgr.J00781 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8269355-8271354 Eucalyptus grandis
Eucgr.J00781 5.0kb upstream 5.0kb upstream 6536 true Chr10: 8271355-8277890 Eucalyptus grandis
Eucgr.J00781 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8272891-8277890 Eucalyptus grandis
Eucgr.J00781 5.0kb downstream 5.0kb downstream 6536 true Chr10: 8266355-8272890 Eucalyptus grandis
Eucgr.J00781 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8266355-8271354 Eucalyptus grandis
Eucgr.J00781 10.0kb upstream 10.0kb upstream 11536 true Chr10: 8271355-8282890 Eucalyptus grandis
Eucgr.J00781 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8272891-8282890 Eucalyptus grandis
Eucgr.J00781 10.0kb downstream 10.0kb downstream 11536 true Chr10: 8261355-8272890 Eucalyptus grandis
Eucgr.J00781 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8261355-8271354 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80801 0.0 14.8295    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.23727 0.0 4.60823   Low
cufflinks 3.94751 0.0 12.5546    
cufflinks 2.2535 0.0 7.62433    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain