Gene : Eucgr.J00768 E. grandis v2.0
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  675
Name:  ? Eucgr.J00768 Secondary Identifier:  ? PAC:32035122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00768 0.5kb upstream 0.5kb upstream 6068 true Chr10: 8075909-8081976 Eucalyptus grandis
Eucgr.J00768 0.5kb upstream 0.5kb upstream 500 false Chr10: 8081477-8081976 Eucalyptus grandis
Eucgr.J00768 0.5kb downstream 0.5kb downstream 6068 true Chr10: 8075409-8081476 Eucalyptus grandis
Eucgr.J00768 0.5kb downstream 0.5kb downstream 500 false Chr10: 8075409-8075908 Eucalyptus grandis
Eucgr.J00768 1.0kb upstream 1.0kb upstream 6568 true Chr10: 8075909-8082476 Eucalyptus grandis
Eucgr.J00768 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8081477-8082476 Eucalyptus grandis
Eucgr.J00768 1.0kb downstream 1.0kb downstream 6568 true Chr10: 8074909-8081476 Eucalyptus grandis
Eucgr.J00768 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8074909-8075908 Eucalyptus grandis
Eucgr.J00768 2.0kb upstream 2.0kb upstream 7568 true Chr10: 8075909-8083476 Eucalyptus grandis
Eucgr.J00768 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8081477-8083476 Eucalyptus grandis
Eucgr.J00768 2.0kb downstream 2.0kb downstream 7568 true Chr10: 8073909-8081476 Eucalyptus grandis
Eucgr.J00768 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8073909-8075908 Eucalyptus grandis
Eucgr.J00768 5.0kb upstream 5.0kb upstream 10568 true Chr10: 8075909-8086476 Eucalyptus grandis
Eucgr.J00768 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8081477-8086476 Eucalyptus grandis
Eucgr.J00768 5.0kb downstream 5.0kb downstream 10568 true Chr10: 8070909-8081476 Eucalyptus grandis
Eucgr.J00768 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8070909-8075908 Eucalyptus grandis
Eucgr.J00768 10.0kb upstream 10.0kb upstream 15568 true Chr10: 8075909-8091476 Eucalyptus grandis
Eucgr.J00768 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8081477-8091476 Eucalyptus grandis
Eucgr.J00768 10.0kb downstream 10.0kb downstream 15568 true Chr10: 8065909-8081476 Eucalyptus grandis
Eucgr.J00768 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8065909-8075908 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58464 0.0 4.9352   Low
cufflinks 4.6106 0.0 12.8148    
cufflinks 4.60666 0.0 13.9424    
cufflinks 7.72357 0.0 23.4471    
cufflinks 10.2457 0.0 27.0526   High
cufflinks 5.65566 0.0 13.547    

0 Strain