Gene : Eucgr.J01450 E. grandis v2.0
Defline:  (1 of 1) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  1227
Name:  ? Eucgr.J01450 Secondary Identifier:  ? PAC:32032931
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01450 0.5kb upstream 0.5kb upstream 5868 true Chr10: 17375017-17380884 Eucalyptus grandis
Eucgr.J01450 0.5kb upstream 0.5kb upstream 500 false Chr10: 17375017-17375516 Eucalyptus grandis
Eucgr.J01450 0.5kb downstream 0.5kb downstream 5868 true Chr10: 17375517-17381384 Eucalyptus grandis
Eucgr.J01450 0.5kb downstream 0.5kb downstream 500 false Chr10: 17380885-17381384 Eucalyptus grandis
Eucgr.J01450 1.0kb upstream 1.0kb upstream 6368 true Chr10: 17374517-17380884 Eucalyptus grandis
Eucgr.J01450 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17374517-17375516 Eucalyptus grandis
Eucgr.J01450 1.0kb downstream 1.0kb downstream 6368 true Chr10: 17375517-17381884 Eucalyptus grandis
Eucgr.J01450 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17380885-17381884 Eucalyptus grandis
Eucgr.J01450 2.0kb upstream 2.0kb upstream 7368 true Chr10: 17373517-17380884 Eucalyptus grandis
Eucgr.J01450 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17373517-17375516 Eucalyptus grandis
Eucgr.J01450 2.0kb downstream 2.0kb downstream 7368 true Chr10: 17375517-17382884 Eucalyptus grandis
Eucgr.J01450 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17380885-17382884 Eucalyptus grandis
Eucgr.J01450 5.0kb upstream 5.0kb upstream 10368 true Chr10: 17370517-17380884 Eucalyptus grandis
Eucgr.J01450 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17370517-17375516 Eucalyptus grandis
Eucgr.J01450 5.0kb downstream 5.0kb downstream 10368 true Chr10: 17375517-17385884 Eucalyptus grandis
Eucgr.J01450 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17380885-17385884 Eucalyptus grandis
Eucgr.J01450 10.0kb upstream 10.0kb upstream 15368 true Chr10: 17365517-17380884 Eucalyptus grandis
Eucgr.J01450 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17365517-17375516 Eucalyptus grandis
Eucgr.J01450 10.0kb downstream 10.0kb downstream 15368 true Chr10: 17375517-17390884 Eucalyptus grandis
Eucgr.J01450 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17380885-17390884 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15016 0.0 18.8714    
cufflinks 10.8046 0.0 29.0149   High
cufflinks 6.4581 0.0 16.5516    
cufflinks 9.37028 0.0 25.9375    
cufflinks 8.5636 0.0 22.8506    
cufflinks 5.62937 0.0 13.4049   Low

0 Strain