Gene : Eucgr.J01233 E. grandis v2.0
Defline:  (1 of 1) PTHR31100:SF13 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 15 Genomic Order:  1117
Name:  ? Eucgr.J01233 Secondary Identifier:  ? PAC:32034759
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01233 0.5kb upstream 0.5kb upstream 1538 true Chr10: 14344509-14346046 Eucalyptus grandis
Eucgr.J01233 0.5kb upstream 0.5kb upstream 500 false Chr10: 14345547-14346046 Eucalyptus grandis
Eucgr.J01233 0.5kb downstream 0.5kb downstream 1538 true Chr10: 14344009-14345546 Eucalyptus grandis
Eucgr.J01233 0.5kb downstream 0.5kb downstream 500 false Chr10: 14344009-14344508 Eucalyptus grandis
Eucgr.J01233 1.0kb upstream 1.0kb upstream 2038 true Chr10: 14344509-14346546 Eucalyptus grandis
Eucgr.J01233 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14345547-14346546 Eucalyptus grandis
Eucgr.J01233 1.0kb downstream 1.0kb downstream 2038 true Chr10: 14343509-14345546 Eucalyptus grandis
Eucgr.J01233 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14343509-14344508 Eucalyptus grandis
Eucgr.J01233 2.0kb upstream 2.0kb upstream 3038 true Chr10: 14344509-14347546 Eucalyptus grandis
Eucgr.J01233 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14345547-14347546 Eucalyptus grandis
Eucgr.J01233 2.0kb downstream 2.0kb downstream 3038 true Chr10: 14342509-14345546 Eucalyptus grandis
Eucgr.J01233 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14342509-14344508 Eucalyptus grandis
Eucgr.J01233 5.0kb upstream 5.0kb upstream 6038 true Chr10: 14344509-14350546 Eucalyptus grandis
Eucgr.J01233 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14345547-14350546 Eucalyptus grandis
Eucgr.J01233 5.0kb downstream 5.0kb downstream 6038 true Chr10: 14339509-14345546 Eucalyptus grandis
Eucgr.J01233 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14339509-14344508 Eucalyptus grandis
Eucgr.J01233 10.0kb upstream 10.0kb upstream 11038 true Chr10: 14344509-14355546 Eucalyptus grandis
Eucgr.J01233 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14345547-14355546 Eucalyptus grandis
Eucgr.J01233 10.0kb downstream 10.0kb downstream 11038 true Chr10: 14334509-14345546 Eucalyptus grandis
Eucgr.J01233 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14334509-14344508 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060975 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.6874 0.0 4.818   High
cufflinks 0.804994 0.0 2.4899    
cufflinks 1.10084 0.0 3.25471    

0 Strain