Gene : Eucgr.J01245 E. grandis v2.0
Defline:  (1 of 2) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  1105
Name:  ? Eucgr.J01245 Secondary Identifier:  ? PAC:32033986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01245 0.5kb upstream 0.5kb upstream 4310 true Chr10: 14037073-14041382 Eucalyptus grandis
Eucgr.J01245 0.5kb upstream 0.5kb upstream 500 false Chr10: 14037073-14037572 Eucalyptus grandis
Eucgr.J01245 0.5kb downstream 0.5kb downstream 4310 true Chr10: 14037573-14041882 Eucalyptus grandis
Eucgr.J01245 0.5kb downstream 0.5kb downstream 500 false Chr10: 14041383-14041882 Eucalyptus grandis
Eucgr.J01245 1.0kb upstream 1.0kb upstream 4810 true Chr10: 14036573-14041382 Eucalyptus grandis
Eucgr.J01245 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14036573-14037572 Eucalyptus grandis
Eucgr.J01245 1.0kb downstream 1.0kb downstream 4810 true Chr10: 14037573-14042382 Eucalyptus grandis
Eucgr.J01245 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14041383-14042382 Eucalyptus grandis
Eucgr.J01245 2.0kb upstream 2.0kb upstream 5810 true Chr10: 14035573-14041382 Eucalyptus grandis
Eucgr.J01245 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14035573-14037572 Eucalyptus grandis
Eucgr.J01245 2.0kb downstream 2.0kb downstream 5810 true Chr10: 14037573-14043382 Eucalyptus grandis
Eucgr.J01245 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14041383-14043382 Eucalyptus grandis
Eucgr.J01245 5.0kb upstream 5.0kb upstream 8810 true Chr10: 14032573-14041382 Eucalyptus grandis
Eucgr.J01245 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14032573-14037572 Eucalyptus grandis
Eucgr.J01245 5.0kb downstream 5.0kb downstream 8810 true Chr10: 14037573-14046382 Eucalyptus grandis
Eucgr.J01245 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14041383-14046382 Eucalyptus grandis
Eucgr.J01245 10.0kb upstream 10.0kb upstream 13810 true Chr10: 14027573-14041382 Eucalyptus grandis
Eucgr.J01245 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14027573-14037572 Eucalyptus grandis
Eucgr.J01245 10.0kb downstream 10.0kb downstream 13810 true Chr10: 14037573-14051382 Eucalyptus grandis
Eucgr.J01245 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14041383-14051382 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064371 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9035 0.0 26.498    
cufflinks 28.0929 0.0 62.556    
cufflinks 11.4218 0.0 25.4225    
cufflinks 40.2239 0.0 91.009 High High
cufflinks 8.24016 0.0 18.5713   Low
cufflinks 13.4139 0.0 29.8027    

0 Strain