Gene : Eucgr.J01249 E. grandis v2.0
Defline:  (1 of 1) PTHR12585:SF36 - SISTER CHROMATID COHESION 1 PROTEIN 3 Genomic Order:  1103
Name:  ? Eucgr.J01249 Secondary Identifier:  ? PAC:32034969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01249 0.5kb upstream 0.5kb upstream 6144 true Chr10: 13975528-13981671 Eucalyptus grandis
Eucgr.J01249 0.5kb upstream 0.5kb upstream 500 false Chr10: 13975528-13976027 Eucalyptus grandis
Eucgr.J01249 0.5kb downstream 0.5kb downstream 6144 true Chr10: 13976028-13982171 Eucalyptus grandis
Eucgr.J01249 0.5kb downstream 0.5kb downstream 500 false Chr10: 13981672-13982171 Eucalyptus grandis
Eucgr.J01249 1.0kb upstream 1.0kb upstream 6644 true Chr10: 13975028-13981671 Eucalyptus grandis
Eucgr.J01249 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13975028-13976027 Eucalyptus grandis
Eucgr.J01249 1.0kb downstream 1.0kb downstream 6644 true Chr10: 13976028-13982671 Eucalyptus grandis
Eucgr.J01249 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13981672-13982671 Eucalyptus grandis
Eucgr.J01249 2.0kb upstream 2.0kb upstream 7644 true Chr10: 13974028-13981671 Eucalyptus grandis
Eucgr.J01249 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13974028-13976027 Eucalyptus grandis
Eucgr.J01249 2.0kb downstream 2.0kb downstream 7644 true Chr10: 13976028-13983671 Eucalyptus grandis
Eucgr.J01249 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13981672-13983671 Eucalyptus grandis
Eucgr.J01249 5.0kb upstream 5.0kb upstream 10644 true Chr10: 13971028-13981671 Eucalyptus grandis
Eucgr.J01249 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13971028-13976027 Eucalyptus grandis
Eucgr.J01249 5.0kb downstream 5.0kb downstream 10644 true Chr10: 13976028-13986671 Eucalyptus grandis
Eucgr.J01249 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13981672-13986671 Eucalyptus grandis
Eucgr.J01249 10.0kb upstream 10.0kb upstream 15644 true Chr10: 13966028-13981671 Eucalyptus grandis
Eucgr.J01249 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13966028-13976027 Eucalyptus grandis
Eucgr.J01249 10.0kb downstream 10.0kb downstream 15644 true Chr10: 13976028-13991671 Eucalyptus grandis
Eucgr.J01249 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13981672-13991671 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066779 5270 Rosid View MSA
123738788 5271 Pentapetalae View MSA
122789248 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7921 0.0 4.73792    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16852 0.0 3.21248    
cufflinks 0.0861723 0.0 0.324674 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.641742 0.0 1.89736 Low  

0 Strain