Gene : Eucgr.J01207 E. grandis v2.0
Defline:  (1 of 1) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11 Genomic Order:  1066
Name:  ? Eucgr.J01207 Secondary Identifier:  ? PAC:32034132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01207 0.5kb upstream 0.5kb upstream 3239 true Chr10: 13217039-13220277 Eucalyptus grandis
Eucgr.J01207 0.5kb upstream 0.5kb upstream 500 false Chr10: 13217039-13217538 Eucalyptus grandis
Eucgr.J01207 0.5kb downstream 0.5kb downstream 3239 true Chr10: 13217539-13220777 Eucalyptus grandis
Eucgr.J01207 0.5kb downstream 0.5kb downstream 500 false Chr10: 13220278-13220777 Eucalyptus grandis
Eucgr.J01207 1.0kb upstream 1.0kb upstream 3739 true Chr10: 13216539-13220277 Eucalyptus grandis
Eucgr.J01207 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13216539-13217538 Eucalyptus grandis
Eucgr.J01207 1.0kb downstream 1.0kb downstream 3739 true Chr10: 13217539-13221277 Eucalyptus grandis
Eucgr.J01207 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13220278-13221277 Eucalyptus grandis
Eucgr.J01207 2.0kb upstream 2.0kb upstream 4739 true Chr10: 13215539-13220277 Eucalyptus grandis
Eucgr.J01207 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13215539-13217538 Eucalyptus grandis
Eucgr.J01207 2.0kb downstream 2.0kb downstream 4739 true Chr10: 13217539-13222277 Eucalyptus grandis
Eucgr.J01207 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13220278-13222277 Eucalyptus grandis
Eucgr.J01207 5.0kb upstream 5.0kb upstream 7739 true Chr10: 13212539-13220277 Eucalyptus grandis
Eucgr.J01207 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13212539-13217538 Eucalyptus grandis
Eucgr.J01207 5.0kb downstream 5.0kb downstream 7739 true Chr10: 13217539-13225277 Eucalyptus grandis
Eucgr.J01207 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13220278-13225277 Eucalyptus grandis
Eucgr.J01207 10.0kb upstream 10.0kb upstream 12739 true Chr10: 13207539-13220277 Eucalyptus grandis
Eucgr.J01207 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13207539-13217538 Eucalyptus grandis
Eucgr.J01207 10.0kb downstream 10.0kb downstream 12739 true Chr10: 13217539-13230277 Eucalyptus grandis
Eucgr.J01207 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13220278-13230277 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.49441 0.0 15.2315    
cufflinks 1.24021 0.0 3.41046    
cufflinks 11.7617 0.0 26.4507   High
cufflinks 0.862339 0.0 2.46222    
cufflinks 1.48246 0.0 4.00352    
cufflinks 1.34358 0.0 3.69173    

0 Strain