Gene : Eucgr.J01090 E. grandis v2.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  965
Name:  ? Eucgr.J01090 Secondary Identifier:  ? PAC:32032908
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ARO-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6163 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01090 0.5kb upstream 0.5kb upstream 8012 true Chr10: 11916411-11924422 Eucalyptus grandis
Eucgr.J01090 0.5kb upstream 0.5kb upstream 500 false Chr10: 11923923-11924422 Eucalyptus grandis
Eucgr.J01090 0.5kb downstream 0.5kb downstream 8012 true Chr10: 11915911-11923922 Eucalyptus grandis
Eucgr.J01090 0.5kb downstream 0.5kb downstream 500 false Chr10: 11915911-11916410 Eucalyptus grandis
Eucgr.J01090 1.0kb upstream 1.0kb upstream 8512 true Chr10: 11916411-11924922 Eucalyptus grandis
Eucgr.J01090 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11923923-11924922 Eucalyptus grandis
Eucgr.J01090 1.0kb downstream 1.0kb downstream 8512 true Chr10: 11915411-11923922 Eucalyptus grandis
Eucgr.J01090 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11915411-11916410 Eucalyptus grandis
Eucgr.J01090 2.0kb upstream 2.0kb upstream 9512 true Chr10: 11916411-11925922 Eucalyptus grandis
Eucgr.J01090 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11923923-11925922 Eucalyptus grandis
Eucgr.J01090 2.0kb downstream 2.0kb downstream 9512 true Chr10: 11914411-11923922 Eucalyptus grandis
Eucgr.J01090 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11914411-11916410 Eucalyptus grandis
Eucgr.J01090 5.0kb upstream 5.0kb upstream 12512 true Chr10: 11916411-11928922 Eucalyptus grandis
Eucgr.J01090 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11923923-11928922 Eucalyptus grandis
Eucgr.J01090 5.0kb downstream 5.0kb downstream 12512 true Chr10: 11911411-11923922 Eucalyptus grandis
Eucgr.J01090 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11911411-11916410 Eucalyptus grandis
Eucgr.J01090 10.0kb upstream 10.0kb upstream 17512 true Chr10: 11916411-11933922 Eucalyptus grandis
Eucgr.J01090 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11923923-11933922 Eucalyptus grandis
Eucgr.J01090 10.0kb downstream 10.0kb downstream 17512 true Chr10: 11906411-11923922 Eucalyptus grandis
Eucgr.J01090 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11906411-11916410 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
124052499 5270 Rosid View MSA
123620589 5271 Pentapetalae View MSA
122654985 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain