Gene : Eucgr.J01096 E. grandis v2.0
Defline:  (1 of 1) PTHR21649:SF7 - CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC Genomic Order:  970
Name:  ? Eucgr.J01096 Secondary Identifier:  ? PAC:32035218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01096 0.5kb upstream 0.5kb upstream 2064 true Chr10: 12085071-12087134 Eucalyptus grandis
Eucgr.J01096 0.5kb upstream 0.5kb upstream 500 false Chr10: 12086635-12087134 Eucalyptus grandis
Eucgr.J01096 0.5kb downstream 0.5kb downstream 2064 true Chr10: 12084571-12086634 Eucalyptus grandis
Eucgr.J01096 0.5kb downstream 0.5kb downstream 500 false Chr10: 12084571-12085070 Eucalyptus grandis
Eucgr.J01096 1.0kb upstream 1.0kb upstream 2564 true Chr10: 12085071-12087634 Eucalyptus grandis
Eucgr.J01096 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12086635-12087634 Eucalyptus grandis
Eucgr.J01096 1.0kb downstream 1.0kb downstream 2564 true Chr10: 12084071-12086634 Eucalyptus grandis
Eucgr.J01096 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12084071-12085070 Eucalyptus grandis
Eucgr.J01096 2.0kb upstream 2.0kb upstream 3564 true Chr10: 12085071-12088634 Eucalyptus grandis
Eucgr.J01096 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12086635-12088634 Eucalyptus grandis
Eucgr.J01096 2.0kb downstream 2.0kb downstream 3564 true Chr10: 12083071-12086634 Eucalyptus grandis
Eucgr.J01096 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12083071-12085070 Eucalyptus grandis
Eucgr.J01096 5.0kb upstream 5.0kb upstream 6564 true Chr10: 12085071-12091634 Eucalyptus grandis
Eucgr.J01096 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12086635-12091634 Eucalyptus grandis
Eucgr.J01096 5.0kb downstream 5.0kb downstream 6564 true Chr10: 12080071-12086634 Eucalyptus grandis
Eucgr.J01096 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12080071-12085070 Eucalyptus grandis
Eucgr.J01096 10.0kb upstream 10.0kb upstream 11564 true Chr10: 12085071-12096634 Eucalyptus grandis
Eucgr.J01096 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12086635-12096634 Eucalyptus grandis
Eucgr.J01096 10.0kb downstream 10.0kb downstream 11564 true Chr10: 12075071-12086634 Eucalyptus grandis
Eucgr.J01096 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12075071-12085070 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 194.186 0.0 536.761 High  
cufflinks 12.7406 0.0 30.8646    
cufflinks 85.5887 0.0 239.067 High  
cufflinks 0.278427 0.0 1.55965 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 710.825 0.0 2879.19 High High

0 Strain