Gene : Eucgr.J01108 E. grandis v2.0
Defline:  (1 of 4) PTHR22880:SF163 - TRANSCRIPTION FACTOR GTE1 Genomic Order:  980
Name:  ? Eucgr.J01108 Secondary Identifier:  ? PAC:32035772
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01108 0.5kb upstream 0.5kb upstream 4030 true Chr10: 12176896-12180925 Eucalyptus grandis
Eucgr.J01108 0.5kb upstream 0.5kb upstream 500 false Chr10: 12180426-12180925 Eucalyptus grandis
Eucgr.J01108 0.5kb downstream 0.5kb downstream 4030 true Chr10: 12176396-12180425 Eucalyptus grandis
Eucgr.J01108 0.5kb downstream 0.5kb downstream 500 false Chr10: 12176396-12176895 Eucalyptus grandis
Eucgr.J01108 1.0kb upstream 1.0kb upstream 4530 true Chr10: 12176896-12181425 Eucalyptus grandis
Eucgr.J01108 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12180426-12181425 Eucalyptus grandis
Eucgr.J01108 1.0kb downstream 1.0kb downstream 4530 true Chr10: 12175896-12180425 Eucalyptus grandis
Eucgr.J01108 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12175896-12176895 Eucalyptus grandis
Eucgr.J01108 2.0kb upstream 2.0kb upstream 5530 true Chr10: 12176896-12182425 Eucalyptus grandis
Eucgr.J01108 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12180426-12182425 Eucalyptus grandis
Eucgr.J01108 2.0kb downstream 2.0kb downstream 5530 true Chr10: 12174896-12180425 Eucalyptus grandis
Eucgr.J01108 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12174896-12176895 Eucalyptus grandis
Eucgr.J01108 5.0kb upstream 5.0kb upstream 8530 true Chr10: 12176896-12185425 Eucalyptus grandis
Eucgr.J01108 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12180426-12185425 Eucalyptus grandis
Eucgr.J01108 5.0kb downstream 5.0kb downstream 8530 true Chr10: 12171896-12180425 Eucalyptus grandis
Eucgr.J01108 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12171896-12176895 Eucalyptus grandis
Eucgr.J01108 10.0kb upstream 10.0kb upstream 13530 true Chr10: 12176896-12190425 Eucalyptus grandis
Eucgr.J01108 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12180426-12190425 Eucalyptus grandis
Eucgr.J01108 10.0kb downstream 10.0kb downstream 13530 true Chr10: 12166896-12180425 Eucalyptus grandis
Eucgr.J01108 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12166896-12176895 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051431 5270 Rosid View MSA
123745671 5271 Pentapetalae View MSA
122792234 5272 Eudicot View MSA
122042971 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121343970 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6158 0.0 35.6362    
cufflinks 5.8637 0.0 15.4941   Low
cufflinks 15.4458 0.0 37.2262    
cufflinks 12.7256 0.0 31.0596    
cufflinks 6.40582 0.0 16.8812   Low
cufflinks 22.611 0.0 53.294   High

0 Strain