Gene : Eucgr.J01082 E. grandis v2.0
Defline:  (1 of 16) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  957
Name:  ? Eucgr.J01082 Secondary Identifier:  ? PAC:32035008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01082 0.5kb upstream 0.5kb upstream 4889 true Chr10: 11818857-11823745 Eucalyptus grandis
Eucgr.J01082 0.5kb upstream 0.5kb upstream 500 false Chr10: 11823246-11823745 Eucalyptus grandis
Eucgr.J01082 0.5kb downstream 0.5kb downstream 4889 true Chr10: 11818357-11823245 Eucalyptus grandis
Eucgr.J01082 0.5kb downstream 0.5kb downstream 500 false Chr10: 11818357-11818856 Eucalyptus grandis
Eucgr.J01082 1.0kb upstream 1.0kb upstream 5389 true Chr10: 11818857-11824245 Eucalyptus grandis
Eucgr.J01082 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11823246-11824245 Eucalyptus grandis
Eucgr.J01082 1.0kb downstream 1.0kb downstream 5389 true Chr10: 11817857-11823245 Eucalyptus grandis
Eucgr.J01082 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11817857-11818856 Eucalyptus grandis
Eucgr.J01082 2.0kb upstream 2.0kb upstream 6389 true Chr10: 11818857-11825245 Eucalyptus grandis
Eucgr.J01082 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11823246-11825245 Eucalyptus grandis
Eucgr.J01082 2.0kb downstream 2.0kb downstream 6389 true Chr10: 11816857-11823245 Eucalyptus grandis
Eucgr.J01082 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11816857-11818856 Eucalyptus grandis
Eucgr.J01082 5.0kb upstream 5.0kb upstream 9389 true Chr10: 11818857-11828245 Eucalyptus grandis
Eucgr.J01082 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11823246-11828245 Eucalyptus grandis
Eucgr.J01082 5.0kb downstream 5.0kb downstream 9389 true Chr10: 11813857-11823245 Eucalyptus grandis
Eucgr.J01082 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11813857-11818856 Eucalyptus grandis
Eucgr.J01082 10.0kb upstream 10.0kb upstream 14389 true Chr10: 11818857-11833245 Eucalyptus grandis
Eucgr.J01082 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11823246-11833245 Eucalyptus grandis
Eucgr.J01082 10.0kb downstream 10.0kb downstream 14389 true Chr10: 11808857-11823245 Eucalyptus grandis
Eucgr.J01082 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11808857-11818856 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071972 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97483 0.0 7.41438    
cufflinks 41.8293 0.0 93.9033    
cufflinks 3.62672 0.0 8.85935    
cufflinks 59.8451 0.0 136.98 High High
cufflinks 29.3 0.0 65.0228    
cufflinks 1.43097 0.0 3.84583   Low

0 Strain