Gene : Eucgr.J01916 E. grandis v2.0
Defline:  (1 of 2) PTHR10291:SF6 - DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 1-RELATED Genomic Order:  1610
Name:  ? Eucgr.J01916 Secondary Identifier:  ? PAC:32033457
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01916 0.5kb upstream 0.5kb upstream 2929 true Chr10: 24557194-24560122 Eucalyptus grandis
Eucgr.J01916 0.5kb upstream 0.5kb upstream 500 false Chr10: 24557194-24557693 Eucalyptus grandis
Eucgr.J01916 0.5kb downstream 0.5kb downstream 2929 true Chr10: 24557694-24560622 Eucalyptus grandis
Eucgr.J01916 0.5kb downstream 0.5kb downstream 500 false Chr10: 24560123-24560622 Eucalyptus grandis
Eucgr.J01916 1.0kb upstream 1.0kb upstream 3429 true Chr10: 24556694-24560122 Eucalyptus grandis
Eucgr.J01916 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24556694-24557693 Eucalyptus grandis
Eucgr.J01916 1.0kb downstream 1.0kb downstream 3429 true Chr10: 24557694-24561122 Eucalyptus grandis
Eucgr.J01916 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24560123-24561122 Eucalyptus grandis
Eucgr.J01916 2.0kb upstream 2.0kb upstream 4429 true Chr10: 24555694-24560122 Eucalyptus grandis
Eucgr.J01916 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24555694-24557693 Eucalyptus grandis
Eucgr.J01916 2.0kb downstream 2.0kb downstream 4429 true Chr10: 24557694-24562122 Eucalyptus grandis
Eucgr.J01916 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24560123-24562122 Eucalyptus grandis
Eucgr.J01916 5.0kb upstream 5.0kb upstream 7429 true Chr10: 24552694-24560122 Eucalyptus grandis
Eucgr.J01916 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24552694-24557693 Eucalyptus grandis
Eucgr.J01916 5.0kb downstream 5.0kb downstream 7429 true Chr10: 24557694-24565122 Eucalyptus grandis
Eucgr.J01916 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24560123-24565122 Eucalyptus grandis
Eucgr.J01916 10.0kb upstream 10.0kb upstream 12429 true Chr10: 24547694-24560122 Eucalyptus grandis
Eucgr.J01916 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24547694-24557693 Eucalyptus grandis
Eucgr.J01916 10.0kb downstream 10.0kb downstream 12429 true Chr10: 24557694-24570122 Eucalyptus grandis
Eucgr.J01916 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24560123-24570122 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065300 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0923391 0.0 0.429459 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00274573 0.0 0.0611015 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.43954 0.0 1.488 Low High
cufflinks 0.0388418 0.0 0.252055 Low  

0 Strain