Gene : Eucgr.J01893 E. grandis v2.0
Defline:  (1 of 3) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  1589
Name:  ? Eucgr.J01893 Secondary Identifier:  ? PAC:32035193
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01893 0.5kb upstream 0.5kb upstream 4045 true Chr10: 24260592-24264636 Eucalyptus grandis
Eucgr.J01893 0.5kb upstream 0.5kb upstream 500 false Chr10: 24260592-24261091 Eucalyptus grandis
Eucgr.J01893 0.5kb downstream 0.5kb downstream 4045 true Chr10: 24261092-24265136 Eucalyptus grandis
Eucgr.J01893 0.5kb downstream 0.5kb downstream 500 false Chr10: 24264637-24265136 Eucalyptus grandis
Eucgr.J01893 1.0kb upstream 1.0kb upstream 4545 true Chr10: 24260092-24264636 Eucalyptus grandis
Eucgr.J01893 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24260092-24261091 Eucalyptus grandis
Eucgr.J01893 1.0kb downstream 1.0kb downstream 4545 true Chr10: 24261092-24265636 Eucalyptus grandis
Eucgr.J01893 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24264637-24265636 Eucalyptus grandis
Eucgr.J01893 2.0kb upstream 2.0kb upstream 5545 true Chr10: 24259092-24264636 Eucalyptus grandis
Eucgr.J01893 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24259092-24261091 Eucalyptus grandis
Eucgr.J01893 2.0kb downstream 2.0kb downstream 5545 true Chr10: 24261092-24266636 Eucalyptus grandis
Eucgr.J01893 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24264637-24266636 Eucalyptus grandis
Eucgr.J01893 5.0kb upstream 5.0kb upstream 8545 true Chr10: 24256092-24264636 Eucalyptus grandis
Eucgr.J01893 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24256092-24261091 Eucalyptus grandis
Eucgr.J01893 5.0kb downstream 5.0kb downstream 8545 true Chr10: 24261092-24269636 Eucalyptus grandis
Eucgr.J01893 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24264637-24269636 Eucalyptus grandis
Eucgr.J01893 10.0kb upstream 10.0kb upstream 13545 true Chr10: 24251092-24264636 Eucalyptus grandis
Eucgr.J01893 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24251092-24261091 Eucalyptus grandis
Eucgr.J01893 10.0kb downstream 10.0kb downstream 13545 true Chr10: 24261092-24274636 Eucalyptus grandis
Eucgr.J01893 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24264637-24274636 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.9353 0.0 87.7519 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 39.3344 0.0 99.9614 High  
cufflinks 20.6827 0.0 48.1905    
cufflinks 12.2989 0.0 28.514   Low
cufflinks 26.4589 0.0 59.2447    

0 Strain