Gene : Eucgr.J01628 E. grandis v2.0
Defline:  (1 of 1) PTHR21320:SF3 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL Genomic Order:  1373
Name:  ? Eucgr.J01628 Secondary Identifier:  ? PAC:32032460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01628 0.5kb upstream 0.5kb upstream 5542 true Chr10: 20415053-20420594 Eucalyptus grandis
Eucgr.J01628 0.5kb upstream 0.5kb upstream 500 false Chr10: 20415053-20415552 Eucalyptus grandis
Eucgr.J01628 0.5kb downstream 0.5kb downstream 5542 true Chr10: 20415553-20421094 Eucalyptus grandis
Eucgr.J01628 0.5kb downstream 0.5kb downstream 500 false Chr10: 20420595-20421094 Eucalyptus grandis
Eucgr.J01628 1.0kb upstream 1.0kb upstream 6042 true Chr10: 20414553-20420594 Eucalyptus grandis
Eucgr.J01628 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20414553-20415552 Eucalyptus grandis
Eucgr.J01628 1.0kb downstream 1.0kb downstream 6042 true Chr10: 20415553-20421594 Eucalyptus grandis
Eucgr.J01628 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20420595-20421594 Eucalyptus grandis
Eucgr.J01628 2.0kb upstream 2.0kb upstream 7042 true Chr10: 20413553-20420594 Eucalyptus grandis
Eucgr.J01628 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20413553-20415552 Eucalyptus grandis
Eucgr.J01628 2.0kb downstream 2.0kb downstream 7042 true Chr10: 20415553-20422594 Eucalyptus grandis
Eucgr.J01628 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20420595-20422594 Eucalyptus grandis
Eucgr.J01628 5.0kb upstream 5.0kb upstream 10042 true Chr10: 20410553-20420594 Eucalyptus grandis
Eucgr.J01628 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20410553-20415552 Eucalyptus grandis
Eucgr.J01628 5.0kb downstream 5.0kb downstream 10042 true Chr10: 20415553-20425594 Eucalyptus grandis
Eucgr.J01628 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20420595-20425594 Eucalyptus grandis
Eucgr.J01628 10.0kb upstream 10.0kb upstream 15042 true Chr10: 20405553-20420594 Eucalyptus grandis
Eucgr.J01628 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20405553-20415552 Eucalyptus grandis
Eucgr.J01628 10.0kb downstream 10.0kb downstream 15042 true Chr10: 20415553-20430594 Eucalyptus grandis
Eucgr.J01628 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20420595-20430594 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061652 5270 Rosid View MSA
123747181 5271 Pentapetalae View MSA
122787948 5272 Eudicot View MSA
122044344 5273 Angiosperm View MSA
121347524 5274 Embryophyte View MSA
123425070 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.39452 0.0 19.4461    
cufflinks 11.0287 0.0 25.7957    
cufflinks 5.83394 0.0 18.3303    
cufflinks 5.06031 0.0 13.1806    
cufflinks 0.817479 0.0 2.99275   Low
cufflinks 5.64804 0.0 14.7566    

0 Strain