Gene : Eucgr.J01606 E. grandis v2.0
Defline:  (1 of 12) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Genomic Order:  1354
Name:  ? Eucgr.J01606 Secondary Identifier:  ? PAC:32035310
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLNSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-3282 Eucalyptus grandis pathologic  
Egrandis PWY-381 Eucalyptus grandis pathologic  
Egrandis PWY-6549 Eucalyptus grandis pathologic  
Egrandis PWY-6963 Eucalyptus grandis pathologic  
Egrandis PWY-6964 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01606 0.5kb upstream 0.5kb upstream 4565 true Chr10: 20209676-20214240 Eucalyptus grandis
Eucgr.J01606 0.5kb upstream 0.5kb upstream 500 false Chr10: 20209676-20210175 Eucalyptus grandis
Eucgr.J01606 0.5kb downstream 0.5kb downstream 4565 true Chr10: 20210176-20214740 Eucalyptus grandis
Eucgr.J01606 0.5kb downstream 0.5kb downstream 500 false Chr10: 20214241-20214740 Eucalyptus grandis
Eucgr.J01606 1.0kb upstream 1.0kb upstream 5065 true Chr10: 20209176-20214240 Eucalyptus grandis
Eucgr.J01606 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20209176-20210175 Eucalyptus grandis
Eucgr.J01606 1.0kb downstream 1.0kb downstream 5065 true Chr10: 20210176-20215240 Eucalyptus grandis
Eucgr.J01606 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20214241-20215240 Eucalyptus grandis
Eucgr.J01606 2.0kb upstream 2.0kb upstream 6065 true Chr10: 20208176-20214240 Eucalyptus grandis
Eucgr.J01606 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20208176-20210175 Eucalyptus grandis
Eucgr.J01606 2.0kb downstream 2.0kb downstream 6065 true Chr10: 20210176-20216240 Eucalyptus grandis
Eucgr.J01606 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20214241-20216240 Eucalyptus grandis
Eucgr.J01606 5.0kb upstream 5.0kb upstream 9065 true Chr10: 20205176-20214240 Eucalyptus grandis
Eucgr.J01606 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20205176-20210175 Eucalyptus grandis
Eucgr.J01606 5.0kb downstream 5.0kb downstream 9065 true Chr10: 20210176-20219240 Eucalyptus grandis
Eucgr.J01606 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20214241-20219240 Eucalyptus grandis
Eucgr.J01606 10.0kb upstream 10.0kb upstream 14065 true Chr10: 20200176-20214240 Eucalyptus grandis
Eucgr.J01606 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20200176-20210175 Eucalyptus grandis
Eucgr.J01606 10.0kb downstream 10.0kb downstream 14065 true Chr10: 20210176-20224240 Eucalyptus grandis
Eucgr.J01606 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20214241-20224240 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.239 0.0 292.053 High  
cufflinks 118.938 0.0 365.356 High  
cufflinks 77.0907 0.0 210.863 High  
cufflinks 170.891 0.0 560.226 High High
cufflinks 113.661 0.0 336.913 High  
cufflinks 53.5112 0.0 143.377 High Low

0 Strain