Gene : Eucgr.J01562 E. grandis v2.0
Defline:  (1 of 2) PTHR11880:SF10 - 40S RIBOSOMAL PROTEIN S15-6 Genomic Order:  1319
Name:  ? Eucgr.J01562 Secondary Identifier:  ? PAC:32033030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01562 0.5kb upstream 0.5kb upstream 2288 true Chr10: 19395127-19397414 Eucalyptus grandis
Eucgr.J01562 0.5kb upstream 0.5kb upstream 500 false Chr10: 19395127-19395626 Eucalyptus grandis
Eucgr.J01562 0.5kb downstream 0.5kb downstream 2288 true Chr10: 19395627-19397914 Eucalyptus grandis
Eucgr.J01562 0.5kb downstream 0.5kb downstream 500 false Chr10: 19397415-19397914 Eucalyptus grandis
Eucgr.J01562 1.0kb upstream 1.0kb upstream 2788 true Chr10: 19394627-19397414 Eucalyptus grandis
Eucgr.J01562 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19394627-19395626 Eucalyptus grandis
Eucgr.J01562 1.0kb downstream 1.0kb downstream 2788 true Chr10: 19395627-19398414 Eucalyptus grandis
Eucgr.J01562 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19397415-19398414 Eucalyptus grandis
Eucgr.J01562 2.0kb upstream 2.0kb upstream 3788 true Chr10: 19393627-19397414 Eucalyptus grandis
Eucgr.J01562 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19393627-19395626 Eucalyptus grandis
Eucgr.J01562 2.0kb downstream 2.0kb downstream 3788 true Chr10: 19395627-19399414 Eucalyptus grandis
Eucgr.J01562 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19397415-19399414 Eucalyptus grandis
Eucgr.J01562 5.0kb upstream 5.0kb upstream 6788 true Chr10: 19390627-19397414 Eucalyptus grandis
Eucgr.J01562 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19390627-19395626 Eucalyptus grandis
Eucgr.J01562 5.0kb downstream 5.0kb downstream 6788 true Chr10: 19395627-19402414 Eucalyptus grandis
Eucgr.J01562 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19397415-19402414 Eucalyptus grandis
Eucgr.J01562 10.0kb upstream 10.0kb upstream 11788 true Chr10: 19385627-19397414 Eucalyptus grandis
Eucgr.J01562 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19385627-19395626 Eucalyptus grandis
Eucgr.J01562 10.0kb downstream 10.0kb downstream 11788 true Chr10: 19395627-19407414 Eucalyptus grandis
Eucgr.J01562 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19397415-19407414 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0682 0.0 32.2354    
cufflinks 5.54416 0.0 16.0967   Low
cufflinks 15.4867 0.0 40.7525   High
cufflinks 7.63155 0.0 21.6041    
cufflinks 13.8238 0.0 36.5519    
cufflinks 6.75781 0.0 19.1685    

0 Strain