Gene : Eucgr.J02294 E. grandis v2.0
Defline:  (1 of 1) PTHR28595:SF1 - 39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL Genomic Order:  1946
Name:  ? Eucgr.J02294 Secondary Identifier:  ? PAC:32033983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02294 0.5kb upstream 0.5kb upstream 3859 true Chr10: 28041007-28044865 Eucalyptus grandis
Eucgr.J02294 0.5kb upstream 0.5kb upstream 500 false Chr10: 28041007-28041506 Eucalyptus grandis
Eucgr.J02294 0.5kb downstream 0.5kb downstream 3859 true Chr10: 28041507-28045365 Eucalyptus grandis
Eucgr.J02294 0.5kb downstream 0.5kb downstream 500 false Chr10: 28044866-28045365 Eucalyptus grandis
Eucgr.J02294 1.0kb upstream 1.0kb upstream 4359 true Chr10: 28040507-28044865 Eucalyptus grandis
Eucgr.J02294 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28040507-28041506 Eucalyptus grandis
Eucgr.J02294 1.0kb downstream 1.0kb downstream 4359 true Chr10: 28041507-28045865 Eucalyptus grandis
Eucgr.J02294 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28044866-28045865 Eucalyptus grandis
Eucgr.J02294 2.0kb upstream 2.0kb upstream 5359 true Chr10: 28039507-28044865 Eucalyptus grandis
Eucgr.J02294 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28039507-28041506 Eucalyptus grandis
Eucgr.J02294 2.0kb downstream 2.0kb downstream 5359 true Chr10: 28041507-28046865 Eucalyptus grandis
Eucgr.J02294 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28044866-28046865 Eucalyptus grandis
Eucgr.J02294 5.0kb upstream 5.0kb upstream 8359 true Chr10: 28036507-28044865 Eucalyptus grandis
Eucgr.J02294 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28036507-28041506 Eucalyptus grandis
Eucgr.J02294 5.0kb downstream 5.0kb downstream 8359 true Chr10: 28041507-28049865 Eucalyptus grandis
Eucgr.J02294 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28044866-28049865 Eucalyptus grandis
Eucgr.J02294 10.0kb upstream 10.0kb upstream 13359 true Chr10: 28031507-28044865 Eucalyptus grandis
Eucgr.J02294 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28031507-28041506 Eucalyptus grandis
Eucgr.J02294 10.0kb downstream 10.0kb downstream 13359 true Chr10: 28041507-28054865 Eucalyptus grandis
Eucgr.J02294 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28044866-28054865 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060646 5270 Rosid View MSA
123747142 5271 Pentapetalae View MSA
122795702 5272 Eudicot View MSA
122046066 5273 Angiosperm View MSA
121350806 5274 Embryophyte View MSA
123425089 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2401 0.0 49.3926    
cufflinks 12.4572 0.0 29.4023   Low
cufflinks 19.146 0.0 48.7706    
cufflinks 21.1573 0.0 59.4067    
cufflinks 24.9962 0.0 66.6552   High
cufflinks 22.7075 0.0 56.4793    

0 Strain