Gene : Eucgr.J02288 E. grandis v2.0
Defline:  (1 of 11) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase Genomic Order:  1942
Name:  ? Eucgr.J02288 Secondary Identifier:  ? PAC:32035567
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02288 0.5kb upstream 0.5kb upstream 4251 true Chr10: 27962959-27967209 Eucalyptus grandis
Eucgr.J02288 0.5kb upstream 0.5kb upstream 500 false Chr10: 27962959-27963458 Eucalyptus grandis
Eucgr.J02288 0.5kb downstream 0.5kb downstream 4251 true Chr10: 27963459-27967709 Eucalyptus grandis
Eucgr.J02288 0.5kb downstream 0.5kb downstream 500 false Chr10: 27967210-27967709 Eucalyptus grandis
Eucgr.J02288 1.0kb upstream 1.0kb upstream 4751 true Chr10: 27962459-27967209 Eucalyptus grandis
Eucgr.J02288 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27962459-27963458 Eucalyptus grandis
Eucgr.J02288 1.0kb downstream 1.0kb downstream 4751 true Chr10: 27963459-27968209 Eucalyptus grandis
Eucgr.J02288 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27967210-27968209 Eucalyptus grandis
Eucgr.J02288 2.0kb upstream 2.0kb upstream 5751 true Chr10: 27961459-27967209 Eucalyptus grandis
Eucgr.J02288 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27961459-27963458 Eucalyptus grandis
Eucgr.J02288 2.0kb downstream 2.0kb downstream 5751 true Chr10: 27963459-27969209 Eucalyptus grandis
Eucgr.J02288 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27967210-27969209 Eucalyptus grandis
Eucgr.J02288 5.0kb upstream 5.0kb upstream 8751 true Chr10: 27958459-27967209 Eucalyptus grandis
Eucgr.J02288 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27958459-27963458 Eucalyptus grandis
Eucgr.J02288 5.0kb downstream 5.0kb downstream 8751 true Chr10: 27963459-27972209 Eucalyptus grandis
Eucgr.J02288 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27967210-27972209 Eucalyptus grandis
Eucgr.J02288 10.0kb upstream 10.0kb upstream 13751 true Chr10: 27953459-27967209 Eucalyptus grandis
Eucgr.J02288 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27953459-27963458 Eucalyptus grandis
Eucgr.J02288 10.0kb downstream 10.0kb downstream 13751 true Chr10: 27963459-27977209 Eucalyptus grandis
Eucgr.J02288 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27967210-27977209 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.27406 0.0 19.9262    
cufflinks 0.359552 0.0 1.22022 Low Low
cufflinks 6.29689 0.0 15.5747    
cufflinks 1.62581 0.0 4.59642    
cufflinks 20.4362 0.0 45.9748   High
cufflinks 4.3053 0.0 11.0518    

0 Strain