Gene : Eucgr.J02221 E. grandis v2.0
Defline:  (1 of 2) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  1881
Name:  ? Eucgr.J02221 Secondary Identifier:  ? PAC:32032915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02221 0.5kb upstream 0.5kb upstream 8155 true Chr10: 27374726-27382880 Eucalyptus grandis
Eucgr.J02221 0.5kb upstream 0.5kb upstream 500 false Chr10: 27374726-27375225 Eucalyptus grandis
Eucgr.J02221 0.5kb downstream 0.5kb downstream 8155 true Chr10: 27375226-27383380 Eucalyptus grandis
Eucgr.J02221 0.5kb downstream 0.5kb downstream 500 false Chr10: 27382881-27383380 Eucalyptus grandis
Eucgr.J02221 1.0kb upstream 1.0kb upstream 8655 true Chr10: 27374226-27382880 Eucalyptus grandis
Eucgr.J02221 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27374226-27375225 Eucalyptus grandis
Eucgr.J02221 1.0kb downstream 1.0kb downstream 8655 true Chr10: 27375226-27383880 Eucalyptus grandis
Eucgr.J02221 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27382881-27383880 Eucalyptus grandis
Eucgr.J02221 2.0kb upstream 2.0kb upstream 9655 true Chr10: 27373226-27382880 Eucalyptus grandis
Eucgr.J02221 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27373226-27375225 Eucalyptus grandis
Eucgr.J02221 2.0kb downstream 2.0kb downstream 9655 true Chr10: 27375226-27384880 Eucalyptus grandis
Eucgr.J02221 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27382881-27384880 Eucalyptus grandis
Eucgr.J02221 5.0kb upstream 5.0kb upstream 12655 true Chr10: 27370226-27382880 Eucalyptus grandis
Eucgr.J02221 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27370226-27375225 Eucalyptus grandis
Eucgr.J02221 5.0kb downstream 5.0kb downstream 12655 true Chr10: 27375226-27387880 Eucalyptus grandis
Eucgr.J02221 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27382881-27387880 Eucalyptus grandis
Eucgr.J02221 10.0kb upstream 10.0kb upstream 17655 true Chr10: 27365226-27382880 Eucalyptus grandis
Eucgr.J02221 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27365226-27375225 Eucalyptus grandis
Eucgr.J02221 10.0kb downstream 10.0kb downstream 17655 true Chr10: 27375226-27392880 Eucalyptus grandis
Eucgr.J02221 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27382881-27392880 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062012 5270 Rosid View MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1618 0.0 31.7587   Low
cufflinks 25.3279 0.0 57.2604   High
cufflinks 12.0477 0.0 30.7681    
cufflinks 24.5047 0.0 60.8467    
cufflinks 22.4471 0.0 50.3233    
cufflinks 10.5544 0.0 24.6549    

0 Strain