Gene : Eucgr.J02166 E. grandis v2.0
Defline:  (1 of 1) 3.2.1.114 - Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase / Mannosidase II Genomic Order:  1835
Name:  ? Eucgr.J02166 Secondary Identifier:  ? PAC:32035687
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7426 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02166 0.5kb upstream 0.5kb upstream 6375 true Chr10: 26934094-26940468 Eucalyptus grandis
Eucgr.J02166 0.5kb upstream 0.5kb upstream 500 false Chr10: 26934094-26934593 Eucalyptus grandis
Eucgr.J02166 0.5kb downstream 0.5kb downstream 6375 true Chr10: 26934594-26940968 Eucalyptus grandis
Eucgr.J02166 0.5kb downstream 0.5kb downstream 500 false Chr10: 26940469-26940968 Eucalyptus grandis
Eucgr.J02166 1.0kb upstream 1.0kb upstream 6875 true Chr10: 26933594-26940468 Eucalyptus grandis
Eucgr.J02166 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26933594-26934593 Eucalyptus grandis
Eucgr.J02166 1.0kb downstream 1.0kb downstream 6875 true Chr10: 26934594-26941468 Eucalyptus grandis
Eucgr.J02166 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26940469-26941468 Eucalyptus grandis
Eucgr.J02166 2.0kb upstream 2.0kb upstream 7875 true Chr10: 26932594-26940468 Eucalyptus grandis
Eucgr.J02166 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26932594-26934593 Eucalyptus grandis
Eucgr.J02166 2.0kb downstream 2.0kb downstream 7875 true Chr10: 26934594-26942468 Eucalyptus grandis
Eucgr.J02166 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26940469-26942468 Eucalyptus grandis
Eucgr.J02166 5.0kb upstream 5.0kb upstream 10875 true Chr10: 26929594-26940468 Eucalyptus grandis
Eucgr.J02166 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26929594-26934593 Eucalyptus grandis
Eucgr.J02166 5.0kb downstream 5.0kb downstream 10875 true Chr10: 26934594-26945468 Eucalyptus grandis
Eucgr.J02166 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26940469-26945468 Eucalyptus grandis
Eucgr.J02166 10.0kb upstream 10.0kb upstream 15875 true Chr10: 26924594-26940468 Eucalyptus grandis
Eucgr.J02166 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26924594-26934593 Eucalyptus grandis
Eucgr.J02166 10.0kb downstream 10.0kb downstream 15875 true Chr10: 26934594-26950468 Eucalyptus grandis
Eucgr.J02166 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26940469-26950468 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068378 5270 Rosid View MSA
123737803 5271 Pentapetalae View MSA
122793098 5272 Eudicot View MSA
122044603 5273 Angiosperm View MSA
121345984 5274 Embryophyte View MSA
123380301 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0468 0.0 35.5276    
cufflinks 23.8908 0.0 53.4996   High
cufflinks 14.8726 0.0 32.9094    
cufflinks 21.3886 0.0 47.7212    
cufflinks 12.7884 0.0 28.2807    
cufflinks 11.9032 0.0 26.3348   Low

0 Strain